PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_04782
Common NameKK1_004902
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 288aa    MW: 31359.2 Da    PI: 7.2331
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_04782genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.00036106128123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++C++C++ F ++  L  H++ H
  C.cajan_04782 106 FSCNYCHRKFYSSQALGGHQNAH 128
                    89*****************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.96E-6103133No hitNo description
PROSITE profilePS5015711.406106133IPR007087Zinc finger, C2H2
PROSITE patternPS000280108128IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MEGLSKKEAE FCDRGSIFSS APEAPPSPST PLQHPREKKQ LLSVDEEEEE KDPKHVVVTT  60
LLDLNVSGDD SFTPEEGAEL NLLTCLDVTA NSSETPTPLD AEPRVFSCNY CHRKFYSSQA  120
LGGHQNAHKR ERSIAKRGHR FGTQQIMAFG LPLLHRNNHY AAAPSMASLP LYGACSNRGL  180
GIQAHSMIHK PSHGFGGSYG HHHGWSRPII DQQPGVAKLA VPDFLRTKSA LSSSQSSVGR  240
FEMVNSTNTM MNSVANKEIT GCVATGGTLL KSSANQEEMK HLDLSLKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_04782
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2362213e-77AC236221.2 Glycine max clone GM_WBc0105L07, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020210229.10.0zinc finger protein 3
TrEMBLA0A151TZ980.0A0A151TZ98_CAJCA; Zinc finger protein 3
STRINGXP_007161148.11e-139(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14393172
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.13e-43C2H2 family protein