PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_04538 | ||||||||
Common Name | KK1_004653 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | ERF | ||||||||
Protein Properties | Length: 280aa MW: 31037.7 Da PI: 5.3769 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.6 | 1.6e-18 | 101 | 151 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr + +g+Wv+eIr+p++ + r++lg++ tae+Aa+a++ a+++++g+ C.cajan_04538 101 TYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKGH 151 69****998.**********843...6***********************99986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 5.1E-13 | 101 | 151 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.261 | 101 | 158 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.85E-22 | 101 | 159 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.3E-36 | 101 | 164 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.5E-32 | 101 | 159 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 8.39E-33 | 102 | 160 | No hit | No description |
PRINTS | PR00367 | 2.3E-10 | 102 | 113 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.3E-10 | 124 | 140 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence Send to blast |
MKKCINMESD ANYNTNTNTN NNIFATSSSS STTTTPSTIT DPNTCTSTSS TSNSDSCTKA 60 KTKTKTKTPQ NDSTTSEGSL ENGKDSKGCK KRQRENNNHP TYRGVRMRNW GKWVSEIREP 120 RKKSRIWLGT YPTAEMAARA HDVAALAIKG HSAYLNFPEL AQQLPRPQST SPKDIQAAAA 180 KAANTAFQQQ VLHHCDEEEE EEEEAEPCQA EQASSSSLSM DNHNTLEASS SPSTNHDDDT 240 LFDLPDLFPH DGLCSYSSSW HLCAVDSGFR LEESFFWENY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 3e-17 | 99 | 158 | 12 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_04538 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020210363.1 | 0.0 | ethylene-responsive transcription factor ERF034 | ||||
Swissprot | Q8LBQ7 | 5e-68 | ERF34_ARATH; Ethylene-responsive transcription factor ERF034 | ||||
TrEMBL | A0A151TYD7 | 0.0 | A0A151TYD7_CAJCA; Ethylene-responsive transcription factor ERF034 family | ||||
STRING | XP_007134514.1 | 1e-110 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF192 | 34 | 263 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 2e-46 | ERF family protein |
Publications ? help Back to Top | |||
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