PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_04538
Common NameKK1_004653
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 280aa    MW: 31037.7 Da    PI: 5.3769
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_04538genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.6e-18101151256
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr +  +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g+
  C.cajan_04538 101 TYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKGH 151
                    69****998.**********843...6***********************99986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.1E-13101151IPR001471AP2/ERF domain
PROSITE profilePS5103223.261101158IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-22101159IPR016177DNA-binding domain
SMARTSM003801.3E-36101164IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.5E-32101159IPR001471AP2/ERF domain
CDDcd000188.39E-33102160No hitNo description
PRINTSPR003672.3E-10102113IPR001471AP2/ERF domain
PRINTSPR003672.3E-10124140IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MKKCINMESD ANYNTNTNTN NNIFATSSSS STTTTPSTIT DPNTCTSTSS TSNSDSCTKA  60
KTKTKTKTPQ NDSTTSEGSL ENGKDSKGCK KRQRENNNHP TYRGVRMRNW GKWVSEIREP  120
RKKSRIWLGT YPTAEMAARA HDVAALAIKG HSAYLNFPEL AQQLPRPQST SPKDIQAAAA  180
KAANTAFQQQ VLHHCDEEEE EEEEAEPCQA EQASSSSLSM DNHNTLEASS SPSTNHDDDT  240
LFDLPDLFPH DGLCSYSSSW HLCAVDSGFR LEESFFWENY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-17991581272Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_04538
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020210363.10.0ethylene-responsive transcription factor ERF034
SwissprotQ8LBQ75e-68ERF34_ARATH; Ethylene-responsive transcription factor ERF034
TrEMBLA0A151TYD70.0A0A151TYD7_CAJCA; Ethylene-responsive transcription factor ERF034 family
STRINGXP_007134514.11e-110(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.12e-46ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]