PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_04089
Common NameKK1_004188
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family CAMTA
Protein Properties Length: 921aa    MW: 104642 Da    PI: 7.7379
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_04089genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1164.32.1e-51291453118
           CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 
                    +e ++rwl+++ei+a+L n++ +++  ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+++np+f rr
  C.cajan_04089  29 EEaRTRWLRPNEIHAMLCNYKYFTINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPNFVRR 124
                    45699******************************************************************************************* PP

           CG-1  98 cywlLeeelekivlvhylevk 118
                    cywlL++++e+ivlvhy+e++
  C.cajan_04089 125 CYWLLDKSMEHIVLVHYRETQ 145
                    ******************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143777.27524150IPR005559CG-1 DNA-binding domain
SMARTSM010761.4E-7427145IPR005559CG-1 DNA-binding domain
PfamPF038591.1E-4530143IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.100.001341456IPR013783Immunoglobulin-like fold
SuperFamilySSF812962.05E-14367454IPR014756Immunoglobulin E-set
CDDcd002043.43E-16540662No hitNo description
SuperFamilySSF484032.02E-19548667IPR020683Ankyrin repeat-containing domain
PfamPF127961.2E-7552632IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.202.9E-17552665IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.282570662IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008811.14603635IPR002110Ankyrin repeat
SMARTSM002482.7E-5603632IPR002110Ankyrin repeat
SMARTSM00248940642671IPR002110Ankyrin repeat
SuperFamilySSF525403.01E-5760838IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM0001516766788IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.437767796IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0021789811IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.279790818IPR000048IQ motif, EF-hand binding site
PfamPF006120.0051791811IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525403.01E-5870896IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM0001516870892IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.078872900IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 921 aa     Download sequence    Send to blast
MANNLAQLVG SEIHGFHTLQ DLDMQSIKEE ARTRWLRPNE IHAMLCNYKY FTINVKPVNL  60
PKSGTIVLFD RKMLRNFRKD GHNWKKKKDG KTVKEAHEHL KVGNEERIHV YYAHGQDNPN  120
FVRRCYWLLD KSMEHIVLVH YRETQELQGS PVTPVNSHSS SVSDSIAPWI LSEEIDSGTT  180
TTYADVSDNI KVKSHELRLH EINTLEWDDL VDANDHNAST EPNGGTIPYF DQQDQILLNG  240
SFSNVASNPS AGTPSFDSLT QPIAGSNSVP YNFAESVNLQ TMDNQANPNE QRNHTVSIGG  300
VDSLDTLVND RLQSQGSFGM WVNHIMSDSP CSVDDPTRES SVSSVYEPYS SLVVDSQQFS  360
LPEQVFTITD VSPTSVSSTE KSKVLVTGFF HKDYMHLSKS NLFCVCGDVS VAAEIVQVGV  420
YRCWVSPHSP GFVNLYLTLD GHKPISQVVN FEYRTPVLHD PAASMEENDN WNEFRLQMRL  480
AFLLFAKQPS LDVFSSKVSP NRLKEARQFA LKTSFISNSW QYLIKSTEDN QIPFSHAKDA  540
LFEIALKNRL REWLLEKIIL GCKTTEYDAH GQSVIHLCAV LGYTWAVSLF SWSGLSLDFR  600
DRFGWTALHW AAYYGREKMV ATLLSVGAKP NLVTDPTPQN PGGCTAADLA YMRGHDGLAA  660
YLSEKSLVQH FNDMSLAGNI SGSLETSTDD PVNSANLTED QQNLKDTLTA YRTTAEAAAR  720
IHAAFREHSL KLRTKVVMSS NPESEAREIV AAMKIQHAFR NYETKKMMAA AARIQHTFRT  780
WKIRKDFLNM RRQAIKIQSA FRCFQERKHY RKILWSVSVV EKAVLRWRLK RKGFRGLQVK  840
TVETGTGDQD QQSDVEEEFF RTGRKQAEER VERSVVRVQA MFRSKKAQED YRRMKLALNQ  900
AKVTVYLYKL MAYSLTLFIN D
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator (PubMed:14581622). Binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in response to cold. Contributes together with CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:14581622, ECO:0000269|PubMed:28351986, ECO:0000305|PubMed:11925432}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00435DAPTransfer from AT4G16150Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_04089
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, wounding, abscisic acid, H(2)O(2) and salicylic acid. {ECO:0000269|PubMed:12218065}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020226044.10.0calmodulin-binding transcription activator 5 isoform X1
SwissprotO234630.0CMTA5_ARATH; Calmodulin-binding transcription activator 5
TrEMBLA0A151SST30.0A0A151SST3_CAJCA; Calmodulin-binding transcription activator 5
STRINGGLYMA07G37090.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42883459
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16150.10.0calmodulin binding;transcription regulators
Publications ? help Back to Top
  1. Ye J, et al.
    Arabidopsis formin3 directs the formation of actin cables and polarized growth in pollen tubes.
    Plant Cell, 2009. 21(12): p. 3868-84
    [PMID:20023198]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]
  3. Lan Y,Liu X,Fu Y,Huang S
    Arabidopsis class I formins control membrane-originated actin polymerization at pollen tube tips.
    PLoS Genet., 2018. 14(11): p. e1007789
    [PMID:30418966]