PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_04032
Common NameKK1_004128
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRF
Protein Properties Length: 444aa    MW: 50717.2 Da    PI: 8.3078
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_04032genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC77.51.3e-2478121144
            WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                    d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e
  C.cajan_04032  78 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 121
                    79***************************************987 PP
2QLQ56.58.6e-20943236
            QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
                   +FT++Q+q+L++Q+l+yKy+a++  +Pp+Ll+ i+
  C.cajan_04032  9 PFTPSQWQELEHQALIYKYMASGISIPPDLLFTIK 43
                   8******************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009511.3E-11844IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.1E-14942IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166622.36944IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.9878122IPR014977WRC domain
PfamPF088791.7E-2079121IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MMNGRNRFPF TPSQWQELEH QALIYKYMAS GISIPPDLLF TIKRTSHLDS PLSSRLLPPH  60
PQHFGWNYLP MGLGRKIDPE PGRCRRTDGK KWRCSKEAYP DSKYCERHMH RGKNRSRKPV  120
EVLKTTTTTT NINTDALSIT KNSPLPALSP TTHDTYHHHH HHSFLYHPSR PSNAVALSFQ  180
DNSAPLFLDT ASCSQNNNNN DCRYVYGLKE EVDEHAFFTE PSGTMRSFSA SSMEDSWQLT  240
PLTISSSSSS KQRSCSGLSN DNNNEYSYLQ LQSLSGNNNK QPQQDHQGCY ISGTGGSDIK  300
CETFMKLGKE EPQKTVHRFF DEWPPKSRGS WLDLDDKSST TQLSISIPTA SHDFATFSST  360
TQRVAFCFCR WLSLVGSLYL NQRPIMYLHG GVHIVFVRSL FNCSPFFHLF VFPWRDPMCL  420
SVCYLLCFQC CVLSALSYIF CFYV
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_04032
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150341e-169AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020227844.10.0growth-regulating factor 1 isoform X2
TrEMBLA0A151SSP90.0A0A151SSP9_CAJCA; Uncharacterized protein
STRINGXP_007154592.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40433459
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.11e-46growth-regulating factor 5