PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_03912
Common NameKK1_004002
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family CAMTA
Protein Properties Length: 1016aa    MW: 114744 Da    PI: 7.5311
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_03912genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1175.66.8e-55201353117
           CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 
                    +e ++rwl++ ei++iL n++k++lt +++ rp+ gsl+L++rk +ryfrkDG+ w+kkkdgktvrE+hekLK g+v+vl+cyYah+e+n++fqrr
  C.cajan_03912  20 QEaEHRWLRPAEICEILRNYKKFNLTPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVREAHEKLKAGSVDVLHCYYAHGEDNENFQRR 115
                    5559******************************************************************************************** PP

           CG-1  98 cywlLeeelekivlvhylev 117
                    +yw+L+e le+ivlvhy+e 
  C.cajan_03912 116 SYWMLDELLEHIVLVHYREI 135
                    *****************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143780.53315141IPR005559CG-1 DNA-binding domain
SMARTSM010766.2E-7718136IPR005559CG-1 DNA-binding domain
PfamPF038593.2E-4921134IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.5E-6456546IPR013783Immunoglobulin-like fold
CDDcd001020.00238457543No hitNo description
PfamPF018331.6E-5458536IPR002909IPT domain
SuperFamilySSF812969.27E-17458543IPR014756Immunoglobulin E-set
CDDcd002042.58E-14640749No hitNo description
SuperFamilySSF484032.62E-16643752IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.204.3E-16649753IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029717.9657751IPR020683Ankyrin repeat-containing domain
SMARTSM002480.15690719IPR002110Ankyrin repeat
PROSITE profilePS500889.484690722IPR002110Ankyrin repeat
SMARTSM00248180729759IPR002110Ankyrin repeat
SuperFamilySSF525401.17E-8857912IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.0067861883IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.114862891IPR000048IQ motif, EF-hand binding site
PfamPF006120.003865882IPR000048IQ motif, EF-hand binding site
SMARTSM000155.6E-4884906IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.725885913IPR000048IQ motif, EF-hand binding site
PfamPF006123.1E-5887906IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1016 aa     Download sequence    Send to blast
MAETTNYIPN PQLELEEILQ EAEHRWLRPA EICEILRNYK KFNLTPDPPV RPPAGSLFLF  60
DRKALRYFRK DGHRWRKKKD GKTVREAHEK LKAGSVDVLH CYYAHGEDNE NFQRRSYWML  120
DELLEHIVLV HYREIKEEIL INDWLVNGYS DLIVGCKSGI PHLPVVPVTL VDSVPSSSKI  180
NSSISVVQTS FTSNANRVDQ NRQASEYEDV NSQNGPQVSS HAQPISNSVP WLTHEAIGFS  240
ELLRKPLISS WPSSSPSYSP GTGLSPCTLI QNSSRNTINM HDKKHHVEGS EADFAVHKIR  300
NAGLDPVCRM QDGVIFRDRL IADMFIQPDK EDLLTVNQMQ NESGQDSFHS QLHDHNNHPI  360
AATTTILAEQ KVQVGDSENG ESEQIEYGEM KKLDSFGRWM NKEIGGDCDN SLMASDSGNY  420
WSTLDAQNED KEVSSLHHMQ LDMDSLGPSL SQEQLFSIHD FSPDWAYTGV RTKVLIVGTF  480
LGSKKLSSET KWGCMFGKIE VSAEVLADNV IRCQTPLHSP GRVPFYVTCS NRLACSEVRE  540
FEFDENPAKF LGPVGIKISP EDEVRLQMRL LKLVDLGPDH KWWKCSVSEC EKCKLRGIIY  600
SMRDDSGVFE ESFQIDGNGH MNPRGVLFQR LMRDKLYEWL ICKIHEGGKG PHVLDDKGQG  660
VIHLAAALGY VWAMAPLVTV GISPNFRDTR GRTGLHWASY FGREETVIVL VKLGAAPGAV  720
EDPTSAFPQG KTPADLASSR GHKGIAAYLA EADLTNQLSV LTVKDIETGN IATTLAADSV  780
YQSAEDDPSN MTMDEQCYLK ESLTVFRKSA HAAASILAAF RARSFCQRQL AKSSSDISEA  840
VLDVVADSLS KVQKMGHFED YLHLAALRIQ KRYRGWKGRK DFLKIRDRIV KIQAHIRGHQ  900
VRKQYKKVVW SVSIVEKVIL RWRRKGAGLR GFRAEQPVGV VAKDSEKSDE YEFLSIGRRQ  960
KTDGVKKALD RIKSMVRNPE ARDQYMRLIM KYQKFKVLTV FPFCWALFCF AILTVP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hry_A2e-1264675158157ank3C2_1
5hry_B2e-1264675158157ank3C2_1
5hry_C2e-1264675158157ank3C2_1
5hry_D2e-1264675158157ank3C2_1
5hry_E2e-1264675158157ank3C2_1
5hry_F2e-1264675158157ank3C2_1
5hry_G2e-1264675158157ank3C2_1
5hry_H2e-1264675158157ank3C2_1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_03912
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020226050.10.0calmodulin-binding transcription activator 1 isoform X1
TrEMBLA0A151SSJ10.0A0A151SSJ1_CAJCA; Calmodulin-binding transcription activator 1
STRINGGLYMA17G04310.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF128892526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.21e-151Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains