PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_03745
Common NameKK1_003826
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HSF
Protein Properties Length: 360aa    MW: 41267.4 Da    PI: 5.2519
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_03745genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.37.9e-36621532102
                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS
   HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 
                    Flkk++e++ed++++ ++sws++ +sf+v+d++ef+k++LpkyFkhsnf+SFvRQLn+YgF+kv++++         weF+++ F+ gkk+ll++i
  C.cajan_03745  62 FLKKTFEMVEDSDTDPVVSWSQSRDSFIVWDSHEFSKTLLPKYFKHSNFSSFVRQLNTYGFRKVDSDR---------WEFANEGFQGGKKHLLKNI 148
                    9****************************************************************999.........******************* PP

                    XXXXX CS
   HSF_DNA-bind  98 krkks 102
                    +r+++
  C.cajan_03745 149 RRRSK 153
                    ***87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467851.63E-3458151IPR011991Winged helix-turn-helix DNA-binding domain
Gene3DG3DSA:1.10.10.103.7E-3858151IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004151.6E-5858151IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004479.7E-3262151IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000566.9E-196285IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000566.9E-19100112IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS004340101125IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000566.9E-19113125IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MGEEVARVKA ELLEESESKE SGVTEEETTV QVKEEVDDGA VNATSSSPKP MEGLHEVGPP  60
PFLKKTFEMV EDSDTDPVVS WSQSRDSFIV WDSHEFSKTL LPKYFKHSNF SSFVRQLNTY  120
GFRKVDSDRW EFANEGFQGG KKHLLKNIRR RSKYNKLHHG SFNMMKPGVE SEVEKLKKDQ  180
NILKVEILKL RQQQENSHVQ LTNVQERVRC AEMKQYQMMF FLTRMARKPA FVDQLIQKLR  240
RKRELEGNDM VKRPRLMGTP CNATFPKATE TAPSVDCRQQ GHKQFSTLQS ELNGFLSETM  300
NTNDMDHPIP SPLEDELENS IVDEEELDVN DSNIYLELED LITKPTDWVG SAGGLVGQTS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B1e-235315117129Heat shock factor protein 1
5d5v_B1e-235315117129Heat shock factor protein 1
5d5v_D1e-235315117129Heat shock factor protein 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_03745
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020228802.10.0heat stress transcription factor A-7a
TrEMBLA0A151SS340.0A0A151SS34_CAJCA; Heat stress transcription factor A-2
STRINGXP_007154638.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106762938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.14e-84heat shock transcription factor A2