PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_03634
Common NameKK1_003714
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 166aa    MW: 18428.2 Da    PI: 8.2633
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_03634genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.000114769123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   ++C++C + F ++  L  H++ H
  C.cajan_03634 47 FSCNYCQRKFYSSQALGGHQNAH 69
                   89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.9E-64474No hitNo description
PROSITE profilePS5015711.0944774IPR007087Zinc finger, C2H2
PROSITE patternPS0002804969IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MSFHPNTSLH LSQPDNENHL SLDLFLEPSS SSSSSPSSLS PIEPRIFSCN YCQRKFYSSQ  60
ALGGHQNAHK LERTLAKKSR ELSSSSMQSY GAQEQRSNFS ASHSHHLGRA LGVVDNQLQG  120
QSYVRLGGRK EFSYGPKEGV ASWSRGYTTS EHVQEDIGQL DLSLRL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of floral organ abscission. Participates in processes that directly or indirectly influence shedding of floral organs. {ECO:0000269|PubMed:18192438}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_03634
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020227849.11e-118zinc finger protein 2
SwissprotQ392611e-28ZFP2_ARATH; Zinc finger protein 2
TrEMBLA0A151SRS11e-117A0A151SRS1_CAJCA; Zinc finger protein 2
STRINGGLYMA13G01090.26e-81(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF96192334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.13e-26zinc finger protein 2