PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_03586
Common NameKK1_003665
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 316aa    MW: 34672 Da    PI: 8.681
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_03586genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.6e-09160207455
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +h+ +Er RR++iN ++  L+el+P +    +k    a +L k +++++sLq
  C.cajan_03586 160 SHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDKIINHVQSLQ 207
                    8*************************9....899999*************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.55E-9154211No hitNo description
SuperFamilySSF474591.27E-14154225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.24156206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-14158220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-6160207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.2E-8162212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MAPPPETANS FTALLELPPT QAVELLHSPE RAGKPPRHSP KPYPLTSFAS AGAANLTFPS  60
NAALIERAAR FSVFAGENSP EVKRELPETD SNPSSTHGGG SVSDPAVENK NSKSAKRKER  120
EKKVKASSKK SKSGADESSG DGEKLPYVHV RVRRGKATDS HSLAERARRE KINARMKLLQ  180
ELVPGCNKIS GTALVLDKII NHVQSLQHEV EILSMKLAAV NPVIDFNLDN LLATERASPM  240
ECNFPPTVAP VMWPEIPQNG NRQQYQQPWQ VDAFHQALWG REENNTNFMT PENSLLSYDS  300
SANSVSLHSN QLKMEL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_03586
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020228920.10.0transcription factor bHLH48
SwissprotQ8VZ023e-81BH048_ARATH; Transcription factor bHLH48
TrEMBLA0A151SRI50.0A0A151SRI5_CAJCA; Transcription factor bHLH48
STRINGXP_007145649.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49852945
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.21e-81bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Li Y,Wang H,Li X,Liang G,Yu D
    Two DELLA-interacting proteins bHLH48 and bHLH60 regulate flowering under long-day conditions in Arabidopsis thaliana.
    J. Exp. Bot., 2017. 68(11): p. 2757-2767
    [PMID:28591805]