PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_02825
Common NameKK1_002892
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 295aa    MW: 32736.3 Da    PI: 7.2502
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_02825genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.00013111133123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++C+ C+k Fs++  L  H++ H
  C.cajan_02825 111 FSCNFCKKEFSSSQALGGHQNAH 133
                    89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.29E-7108138No hitNo description
Gene3DG3DSA:3.30.160.604.4E-5109137IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.78111138IPR007087Zinc finger, C2H2
PfamPF139122.6E-5111135IPR007087Zinc finger, C2H2
PROSITE patternPS000280113133IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MASSRGFEGC PSEASNISAT SEGISHKPCV EEENNVEVIM KGKNAKYEQD QASNSNSRKI  60
LDFVKLSKDE PIHGSNVELD FFTPTKSSSS CKVEGRYENN NEEKSLEAKT FSCNFCKKEF  120
SSSQALGGHQ NAHKKERALA KHRQEIDASA FGNSHFLYYP YPTHSYYGSY NKALGIRMES  180
MIHKQSYPSF PLGFRFGQGW SRQEMLNPSL DRLRMEGLDG NSGIRVLGSD TTLRRKDDLG  240
TIGLIPFLGD VSTNIATNSN STLNRPTLSN MGGDHSKQEE TSCSDSSRID LSLKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_02825
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1984471e-117AC198447.7 Glycine max cultivar Williams 82 clone gmw2-48a19, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020225308.10.0zinc finger protein 3
TrEMBLA0A151SPF70.0A0A151SPF7_CAJCA; Zinc finger protein 3
STRINGGLYMA04G15560.21e-143(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18223074
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.17e-22C2H2 family protein