PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_02820
Common NameKK1_002887
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 232aa    MW: 25601.9 Da    PI: 7.4145
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_02820genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.6e-053355123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   ++C+ C+k Fs++  L  H++ H
  C.cajan_02820 33 FSCNFCKKEFSSSQALGGHQNAH 55
                   89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.55E-73060No hitNo description
Gene3DG3DSA:3.30.160.603.0E-53159IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.7593360IPR007087Zinc finger, C2H2
PROSITE patternPS0002803555IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MGGSSNSCRA NNYEPRDENN NEEKEKSSEA KTFSCNFCKK EFSSSQALGG HQNAHKQERA  60
LAKRRQGIDV GAFGHPHYLY YPYPTHSYYG SYNRALGVRM ESMIHKPSYP SSSLGFRFGQ  120
GWSRQEMLNP SLDRLKMEGF HANSGVRILG SDTTLKTQDD HGTNGNISTV RTQDGHGTIG  180
HIPFLGESST NNVPSKSNPT PLSTIGVDHD HSKQEGTSNS DSSDEIDLSL KL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_02820
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1984471e-112AC198447.7 Glycine max cultivar Williams 82 clone gmw2-48a19, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020225306.11e-174uncharacterized protein LOC109807193
TrEMBLA0A151SPC51e-173A0A151SPC5_CAJCA; Zinc finger protein 3
STRINGGLYMA04G15560.21e-116(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18223074
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.16e-18C2H2 family protein