PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_02493
Common NameKK1_002556
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family G2-like
Protein Properties Length: 338aa    MW: 37833.2 Da    PI: 5.6743
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_02493genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like82.73.9e-261768155
        G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                   kprl+WtpeLH+rF ea++qLG   +AtPk+++++m+++gLtl+h+kSHLQk+Rl
  C.cajan_02493 17 KPRLKWTPELHQRFTEAINQLG---EATPKSLMRVMGIPGLTLYHLKSHLQKFRL 68
                   79*******************4...79***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.0E-251570IPR009057Homeodomain-like
SuperFamilySSF466894.03E-141669IPR009057Homeodomain-like
TIGRFAMsTIGR015574.7E-191769IPR006447Myb domain, plants
PfamPF002498.9E-81966IPR001005SANT/Myb domain
PfamPF143792.8E-21112158IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MDLQNQTMRL VLSTDAKPRL KWTPELHQRF TEAINQLGEA TPKSLMRVMG IPGLTLYHLK  60
SHLQKFRLGK SQQLETCSDN TQQGYSEIQS SDGHCNNENS IGTQNQMTES LKIAQALEMQ  120
MEVQRKLYEQ IEVQRHLQFR IEAQGKYLQT VLTKAQETLV RHSSSTTGIE LAKAELSQLV  180
SIINNACPSS PISELTETRG LSLNHGERKQ DRGTMCSFES SLTSSESSGR TEENQPMDEA  240
ENPQKFNSVS VELPLLAIHP EDRAFKGDTS DGESGRKRST VTDSDGGSVD QPCGKRCGNK  300
LRKSEVSEML DLNSQYQRDI DSSVKEIDLN CSSSFWGQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-161670158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-161670158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-161770157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-161770157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-161770157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-161770157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-161670158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-161670158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-161670158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-161670158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-161670158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-161670158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_02493
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0981690.0BT098169.1 Soybean clone JCVI-FLGm-12I23 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020227292.10.0myb family transcription factor PHL8
TrEMBLA0A151SNI00.0A0A151SNI0_CAJCA; Myb family transcription factor APL
STRINGXP_007158649.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52183253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.13e-71G2-like family protein