PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_02378
Common NameKK1_002440
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family G2-like
Protein Properties Length: 369aa    MW: 41230.6 Da    PI: 6.5137
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_02378genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like993.2e-31210265156
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                    kpr++W++eLH+rF++a++qLGG++ AtPk+i+e mkv+gLt+++vkSHLQk+Rl+
  C.cajan_02378 210 KPRRCWSQELHKRFLHALQQLGGADSATPKQIREQMKVDGLTNDEVKSHLQKFRLH 265
                    79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.25E-17207268IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.1E-28207268IPR009057Homeodomain-like
PROSITE profilePS5129412.782207267IPR017930Myb domain
TIGRFAMsTIGR015571.2E-26210265IPR006447Myb domain, plants
PfamPF002491.2E-6212262IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MQFNQKMGLR EYIEALEEER RKIQVFTKEL PLSLELVTQA IEACRQQLSG TVAEYNLNGQ  60
SECSEQTSMG EGPVFEEFIP LKKRVSQDSV EQEDEDHDED EDEDEDDEQH SHSPKNTDRK  120
KSDWLRSVQL WNPNPPPTKE DVPRKTNVVE VKRNCGAFQP FHREEKSGVA KANASTNGKA  180
PSSPPVPATS STGPVRVESK REEKSQTQRK PRRCWSQELH KRFLHALQQL GGADSATPKQ  240
IREQMKVDGL TNDEVKSHLQ KFRLHTRRSP IHNNGSSHGA PLFLVGNIFV QPPEYGTSTA  300
SGGELTTVTP PTGIYAPVAT HPPPIMKQLD VSQHSQLHSE ERANHSFHSN SPASSSSTHT  360
ITTTTSPAP
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_02378
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311801e-168KT031180.1 Glycine max clone HN_CCL_160 MYB/HD-like transcription factor (Glyma02g10940.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020227498.10.0transcription factor HHO2
TrEMBLA0A151SN460.0A0A151SN46_CAJCA; Two-component response regulator ARR18
STRINGXP_007153350.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39183363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.14e-78G2-like family protein