PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_01947
Common NameKK1_001997
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 373aa    MW: 40686.3 Da    PI: 8.8189
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_01947genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.81.3e-15176221555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    hn+ Er+RRdriN+++  L++l+P+a      K +Ka++L ++++Y+k+Lq
  C.cajan_01947 176 HNQSERKRRDRINQKIKALQRLVPNA-----NKTDKASMLDEVINYLKQLQ 221
                    9************************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.45E-16165225No hitNo description
SuperFamilySSF474591.44E-18169230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.161171220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.4E-13176221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-17176229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.4E-17177226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
SNYEEVAELI WENGQLSMHG LGGLQPEKPI TSRAHDTLES IVQQATFKCC QQPSKFTRQG  60
HAPTSIINSS IGAPSSSTRK PTCSNTNVNV LQQCDILGGR GRGCGCASAG ATFCRDNDAT  120
MMTWASLESG PTLKTMEEDS ACHCGSEIRD NQDDRDSKAE IAQSNSKRRS RIAAIHNQSE  180
RKRRDRINQK IKALQRLVPN ANKTDKASML DEVINYLKQL QAQIQMMNMA SMPQMMVPLA  240
MQQQLQMSML ARMGGGLGMG MGLANINNMV AQTSGPSPRS LPQLNIQQTT TVGAPPGTAP  300
LFVAPSFMMP SMIPPKPQHA SSPSIPLPHP YTNGLNQPIN MDILHNMAAL YQQQMSQNNH  360
HLSSSISQPH QGR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166183KRRSRIAAIHNQSERKRR
2179184ERKRRD
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_01947
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020227575.10.0transcription factor UNE10
TrEMBLA0A151SM030.0A0A151SM03_CAJCA; Transcription factor UNE10 (Fragment)
STRINGGLYMA06G21495.11e-175(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF129992432
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61270.12e-35phytochrome-interacting factor7