PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_01079
Common NameKK1_001107
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 410aa    MW: 45992.1 Da    PI: 9.0637
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_01079genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.3e-13250293755
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er+RR++i++++++Lr+l+Pk      +K++ a+iL  Av+YIk+Lq
  C.cajan_01079 250 VTERNRRNKIKKGLFTLRSLVPKI-----TKMDRAAILADAVDYIKELQ 293
                    57*********************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142151.2E-1410150IPR025610Transcription factor MYC/MYB N-terminal
CDDcd000839.70E-13241297No hitNo description
PROSITE profilePS5088814.602243292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.15E-17246313IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.7E-15249298IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-11250293IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-17250310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00646362406No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MSGFGAVEWL RPLVKTNAWD YIVVWKYGDD PTRFIEWIGC CCRGSCSVNI DVVRPKGEKS  60
EVCHLAPICR DNHIQHQVRT KACEALAQLP FALSLYSGVH GEVAISQQSR WLTQVDSIGT  120
QVLIPIVGGL IELFTEKLIP MDMNMIELIT AHGCVSSKQE AISAQSYTTL NINEHLPLRE  180
QYSQWRPPHM STLNPSVHQP ATKQCNSHPS IEGPSRKQKG GLTSLCRNGE DKSKLDKEPH  240
KECYQAKNLV TERNRRNKIK KGLFTLRSLV PKITKMDRAA ILADAVDYIK ELQTQVKQLK  300
DEVRALEVQN SEKNTPQLRM PLGKEQEGTR SNPLNQSSSE CTKKTQMKVQ AEVHHISKTC  360
FMIKLYCEQK KGGFSKLMEA IHSIGLRVAS ANMTTFGGKS LNILTVEVGI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1253260NRRNKIKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_01079
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150345e-61AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007153735.10.0hypothetical protein PHAVU_003G060700g
RefseqXP_027920384.10.0transcription factor bHLH90
TrEMBLA0A151SJE00.0A0A151SJE0_CAJCA; Transcription factor bHLH90
STRINGXP_007153735.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF122653033
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10610.12e-67bHLH family protein