PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_00832
Common NameKK1_000855
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Dof
Protein Properties Length: 224aa    MW: 24299.1 Da    PI: 9.752
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_00832genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof45.81.3e-1426533662
         zf-Dof 36 C.rryWtkGGalrnvPvGggrrknkkss 62
                   C rryWt+GG+lrnvPvGgg+rknkk++
  C.cajan_00832 26 CpRRYWTEGGSLRNVPVGGGSRKNKKVT 53
                   449**********************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-71851IPR003851Zinc finger, Dof-type
PfamPF027015.1E-92651IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MEGMAPNSCA RPVLEKKARP QEQLNCPRRY WTEGGSLRNV PVGGGSRKNK KVTSATSSSS  60
SSSKVPDLNP PNLSSVSAQN PKIMHGGQDL NLAFPSMDKY HHGMPPYVEM QQQNNKLLRS  120
SMASRGLNPY APSSLIPNST NNNALYPSGF PMQEVKPSLS FAPSVDGMGN RSYDHQVQER  180
SGGRVLFPFG DVKQLSASGA EVEHNKEQGN STGYWSGMIG EGTW
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor specifically involved in the maternal control of seed germination. Regulates transcription by binding to a 5'-AA[AG]G-3' consensus core sequence. May ensure the inactivity of a component that would be activated to trigger germination as a consequence of red light perception.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_00832
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP6629101e-180KP662910.1 Cajanus cajan Dof5 (Dof5) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020226575.11e-149dof zinc finger protein DOF2.5
RefseqXP_020226577.11e-149dof zinc finger protein DOF2.5
RefseqXP_029129389.11e-149dof zinc finger protein DOF2.5
SwissprotQ433852e-33DOF37_ARATH; Dof zinc finger protein DOF3.7
TrEMBLA0A151SIN11e-164A0A151SIN1_CAJCA; Dof zinc finger protein DOF3.7
STRINGGLYMA07G05950.11e-117(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67434137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.42e-35Dof family protein