PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_00400
Common NameKK1_000411
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 318aa    MW: 35043.2 Da    PI: 6.7174
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_00400genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH120.00041822201255
                    HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  C.cajan_00400 182 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 220
                    6677889999999999998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.719170219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-10180230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-7180229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.62E-6180224No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MMAGNPNWWS MHPPPLIPPQ YVLPPSSIPF NSLTENPEPP QSWSQLLSTG LPGEEEKLGF  60
SHFQPKNWDV QFLNTASRVP ILDVIKQEVS QRGNLYDHGL EEFQASGPAG SSWSHMVPVS  120
SPGSCVTSLS SNNILDFTYN KSDHRNNLLQ DQISECNSTA TVAVWKKARV QPSSSQAPLK  180
VRKEKLGDRI TALHQLVSPF GKTDTASVLL EAIGYIRFLQ GQIEALSSPY LDNASNSKNM  240
RNQQSVHGER NSVFPEDPGQ LLNDNNGLKR KGAPNQDAEE KPKDLKSRGL CLVPVSCTQH  300
VGSENGADYW PPAYGRGF
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_00400
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020227257.10.0transcription factor bHLH68
SwissprotQ8S3D13e-67BH068_ARATH; Transcription factor bHLH68
TrEMBLA0A151SHK30.0A0A151SHK3_CAJCA; Transcription factor bHLH68
STRINGGLYMA15G02020.11e-175(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12233379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.11e-66bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Le Hir R, et al.
    AtbHLH68 transcription factor contributes to the regulation of ABA homeostasis and drought stress tolerance in Arabidopsis thaliana.
    Physiol Plant, 2017. 160(3): p. 312-327
    [PMID:28369972]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]