PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa20g033160.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family EIL
Protein Properties Length: 531aa    MW: 60109.7 Da    PI: 7.1385
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa20g033160.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3382.75.6e-117494161354
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa.tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                     eel+k+ w+d+++lk+l+e+ k+    k+    +++  ++  ++++r++m +aQDgiLkYM k+me ++a+GfvYgi+ e+gk+v+g+sd+Lr+W
  Csa20g033160.1  49 EELEKKIWRDKQRLKQLREMAKNGGLGKKLLmNQQQLGDDLLQHSSRRTMYKAQDGILKYMSKTMERYKAKGFVYGIVLENGKTVTGSSDNLREW 143
                     8*******************99977666664133344569999**************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT CS
            EIN3  95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskd 189
                     Wk+kv+fdrng aai+k+q + ++++ ++  +  +  + h+l elqDTtlg+LLsalm  c+ppqrrfpl+kgv+pPWWPtGke+ww++l+l++d
  Csa20g033160.1 144 WKDKVRFDRNGLAAIMKHQRDINLSDVSDLGTDVGDCTAHKLLELQDTTLGALLSALMPNCKPPQRRFPLDKGVTPPWWPTGKEDWWSQLSLPED 238
                     ******************9999998877777667999********************************************************** PP

                     --...-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XX.........XXXXX CS
            EIN3 190 qg..tppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ss.........slrkq 270
                      +  +ppykkphdlkk wkv+vL avi+hm+ +i++i +l+r+s++lq+km+++e + +l+ lnqe++ +++++     s+            ++
  Csa20g033160.1 239 CRglPPPYKKPHDLKKLWKVGVLIAVIRHMASDISNIPNLVRRSRSLQEKMTSREGALWLAALNQEKANVDQMHNPftfSRennntcnfpVPGTG 333
                     *************************************************************************9996653366777766533449 PP

                     XXXXXXXXXXXXXXX....XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXXX CS
            EIN3 271 spkvtlsceqkedve....gkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqney 354
                     +++v +s+++++dve    g   s+  + q  +  +++++v krk + +   ++++  ++ tc++s +++s+++++ +d+n ++++++
  Csa20g033160.1 334 DRNVLFSESTNYDVEgiggG---SHRFNQQYPEVDNNYNCVYKRKFEGDLGISMHQ--TILTCENSLCPYSQPHMGSHDRNLRENHQM 416
                     99*************86433...33345666677779*******965555555544..589*************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048734.6E-11049305No hitNo description
Gene3DG3DSA:1.10.3180.104.9E-61179313IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.57E-53182307IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 531 aa     Download sequence    Send to blast
MYNNNNNRGL FRGLVGSNPV PPFPEGDVCP DTHNAIGEDA SSDEEMEIEE LEKKIWRDKQ  60
RLKQLREMAK NGGLGKKLLM NQQQLGDDLL QHSSRRTMYK AQDGILKYMS KTMERYKAKG  120
FVYGIVLENG KTVTGSSDNL REWWKDKVRF DRNGLAAIMK HQRDINLSDV SDLGTDVGDC  180
TAHKLLELQD TTLGALLSAL MPNCKPPQRR FPLDKGVTPP WWPTGKEDWW SQLSLPEDCR  240
GLPPPYKKPH DLKKLWKVGV LIAVIRHMAS DISNIPNLVR RSRSLQEKMT SREGALWLAA  300
LNQEKANVDQ MHNPFTFSRE NNNTCNFPVP GTGDRNVLFS ESTNYDVEGI GGGSHRFNQQ  360
YPEVDNNYNC VYKRKFEGDL GISMHQTILT CENSLCPYSQ PHMGSHDRNL RENHQMTCPY  420
KVTSFYQPTK TYGMSGSMVP CPDYNRMQQQ QQVQSIQDQY NPPNDLYRPK VEQRGGNSDD  480
LVGSMSPSPL MLDHNPGLAL PADFNGQAET VGMANNLQNQ GQELPTSWLQ *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A6e-541813122131Protein ETHYLENE INSENSITIVE 3
4zds_B6e-541813122131Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa20g033160.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019097395.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 2 protein
SwissprotO231150.0EIL2_ARATH; ETHYLENE INSENSITIVE 3-like 2 protein
TrEMBLR0FER20.0R0FER2_9BRAS; Uncharacterized protein
STRINGXP_010493230.10.0(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM147191621
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21120.10.0ETHYLENE-INSENSITIVE3-like 2