PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa15g044170.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family ERF
Protein Properties Length: 135aa    MW: 14822.3 Da    PI: 6.809
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa15g044170.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.5e-181363255
             AP2  2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +g+++AeIrd      ++ +r++lg+f  ae+Aa+a+++a+ +++g
  Csa15g044170.1 13 KYRGVRKRP-WGKYAAEIRD----SaRHgARVWLGTFNIAEDAARAYDRAAFAMRG 63
                    8********.**********....33236*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.7341371IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.8E-301373IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-211373IPR016177DNA-binding domain
SMARTSM003802.2E-321377IPR001471AP2/ERF domain
CDDcd000188.24E-171372No hitNo description
PfamPF008474.6E-131363IPR001471AP2/ERF domain
PRINTSPR003671.4E-101425IPR001471AP2/ERF domain
PRINTSPR003671.4E-103753IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MERRESSNTN EVKYRGVRKR PWGKYAAEIR DSARHGARVW LGTFNIAEDA ARAYDRAAFA  60
MRGQRAVLNY PHEYPMIGNS PSGGHGNVVA SSSSEYKGGG GGPGNGKEVI EFEYLDDSIL  120
EELLDYGENY NKGT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-351313314128Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa15g044170.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010468409.13e-94PREDICTED: ethylene-responsive transcription factor ERF095-like
SwissprotQ9LTC62e-43ERF95_ARATH; Ethylene-responsive transcription factor ERF095
TrEMBLR0HPH44e-60R0HPH4_9BRAS; Uncharacterized protein
STRINGXP_010468409.11e-93(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.16e-43ERF family protein
Publications ? help Back to Top
  1. Quan R, et al.
    EIN3 and SOS2 synergistically modulate plant salt tolerance.
    Sci Rep, 2017. 7: p. 44637
    [PMID:28300216]