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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa15g018300.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
GRAS |
Protein Properties |
Length: 510aa MW: 57211.4 Da PI: 5.0481 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa15g018300.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 264.8 | 2.9e-81 | 145 | 509 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl...fsevsPilk 92
++lL cA a++s++ +++q++L+ lselas++gd+++Rla + ++AL+++l++ s ++ ++ + + +++ e+ +++k+ f+evsP++
Csa15g018300.1 145 EQLLNPCALAITSRNSSRVQHYLCVLSELASSSGDANRRLADFGLRALQHHLSSsSLPSSSSPVVTFASA-----EVKMFQKTllkFYEVSPWFA 234
689**************************************************93444444444444433.....33333333446********* PP
GRAS 93 fshltaNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg....skeeleetgerLakfAeelgvpfef 178
+ + +aN+aIl+ +++e + +Hi+D+++s+G+QWp+Ll+aL++R+ ++pp++Ri +v++ +++ ++ ++L fA++l++++++
Csa15g018300.1 235 LPNNMANSAILQILAQEpidkKDLHILDIGVSHGMQWPTLLEALSCRSeGPPPHVRISVVSDLTADipfsIGPPAYSYDSQLLGFARSLKINLQI 329
****************99998899************************55667*********99999998889999******************* PP
GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsle 272
+v+ +++ ++++p+E+l+++ +++lh+l s+++er+e +++++sl+Pk v+++e++ + ++++F+++f+++ley+++++ds++
Csa15g018300.1 330 SVI-------DKFQLIDTSPHETLIICAQFRLHHLK---YSIPEERSEAVRALRSLRPKGVILCENNGEGsTNGDFAAGFSRKLEYMWKFLDSTS 414
*96.......566889*******************8...88999999********************9998999********************9 PP
GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrp 366
+++ +e+++ Er+l++ e+++v++++g++ e + kW er++eaGF + +++e+a + ak+llrk++ +++ r+e+ + + l+Wk+++
Csa15g018300.1 415 SGF----KEENSEERKLIEGEATKVLMNAGEM----DEGKDKWYERMREAGFAAQAFGEDAIDGAKSLLRKYDkNWEIRMEDGDTFAGLTWKGEA 501
997....8888899999**************9....999**********************************666666666666666******* PP
GRAS 367 LvsvSaWr 374
+ ++S W+
Csa15g018300.1 502 VSFCSLWK 509
*******8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 510 aa
Download sequence Send
to blast |
MSLDETEPPN QTLDHILSWL EDSMSLSPLP GFDDSYLLHE FDGSQTWEWD QTQDPEHGFI 60 QSYSQDLSAY VGCEAINLEV VTEAPFIYLD PPPELQQPND QSRKRSSEKL IEAQHVKRSA 120 RSKKKSNKSS EKSCKDGNKE ERWAEQLLNP CALAITSRNS SRVQHYLCVL SELASSSGDA 180 NRRLADFGLR ALQHHLSSSS LPSSSSPVVT FASAEVKMFQ KTLLKFYEVS PWFALPNNMA 240 NSAILQILAQ EPIDKKDLHI LDIGVSHGMQ WPTLLEALSC RSEGPPPHVR ISVVSDLTAD 300 IPFSIGPPAY SYDSQLLGFA RSLKINLQIS VIDKFQLIDT SPHETLIICA QFRLHHLKYS 360 IPEERSEAVR ALRSLRPKGV ILCENNGEGS TNGDFAAGFS RKLEYMWKFL DSTSSGFKEE 420 NSEERKLIEG EATKVLMNAG EMDEGKDKWY ERMREAGFAA QAFGEDAIDG AKSLLRKYDK 480 NWEIRMEDGD TFAGLTWKGE AVSFCSLWK*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC237328 | 0.0 | AC237328.1 Arabidopsis lyrata clone JGIFAFI-41L7, complete sequence. |