PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Csa12g009690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family | bZIP | ||||||||
Protein Properties | Length: 410aa MW: 44599.4 Da PI: 9.8351 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43.6 | 6.3e-14 | 314 | 358 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r++r++kNRe+A rsR+RK+a++ eLe ++++L++ N++L+k+ Csa12g009690.1 314 RRQKRMIKNRESAARSRARKQAYTMELEAEIAQLKELNEELQKKQ 358 69*************************************999764 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.6E-11 | 310 | 368 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.473 | 312 | 357 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.1E-13 | 314 | 362 | No hit | No description |
SuperFamily | SSF57959 | 8.75E-10 | 314 | 358 | No hit | No description |
CDD | cd14707 | 6.13E-25 | 314 | 368 | No hit | No description |
Pfam | PF00170 | 1.2E-11 | 314 | 361 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 317 | 332 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 410 aa Download sequence Send to blast |
MNMEELLKNI WTAEESHSLM GNNTGFNNIN NGGNNGNAAI NNNNGGVSVV GVGGETGGGF 60 FNGGSLQRQG SLTLPRTISQ RTVDDVWKEL MKEDDIGNGV GNVGTSGIPQ RQQTLGEMTL 120 EQFLLRAGVV REEPPQVQQP VNNFNGGFYG FGSNAGLGTT PNVIGANQPH SFAGNGAVVR 180 PDMLTAQTQP LQMQQSQRVQ QPQPLIQKQE RPFPKQTTIA FSNTVDAVNR SLPVTQFQEV 240 KPSILGKRDY PMDNNLLQAV DFKTGVTVAA VSPGSQMSPD LTPKSALDAS LSPVPYMFGR 300 VRKTGAVLEK VIERRQKRMI KNRESAARSR ARKQAYTMEL EAEIAQLKEL NEELQKKQVA 360 IMEKQKNQYS SGATAPANGM QKAMLAKDID RSLVELIMAF EELNKAQKL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Csa12g009690.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019089286.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
Swissprot | Q9M7Q3 | 0.0 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | E4MY11 | 0.0 | E4MY11_EUTHA; mRNA, clone: RTFL01-30-J01 | ||||
TrEMBL | V4MBG2 | 0.0 | V4MBG2_EUTSA; Uncharacterized protein | ||||
STRING | XP_010451060.1 | 0.0 | (Camelina sativa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM734 | 27 | 129 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 1e-160 | abscisic acid responsive elements-binding factor 3 |