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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa04g056170.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
AP2 |
Protein Properties |
Length: 458aa MW: 50095 Da PI: 8.9266 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa04g056170.2 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 22.6 | 2.7e-07 | 72 | 105 | 1 | 31 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.kr.krf 31
s y+GV++++++gr++A+++d ++n+ ++ k
Csa04g056170.2 72 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNkKGK 105
57*******************6666666443444 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 458 aa
Download sequence Send
to blast |
MASVSSSDHG PKTEAGCSGG GGGGGGESSE TVAASDQMLL YRGFKKAKKE RGCTAKERIS 60 KMPPCTAGKR SSIYRGVTRH RWTGRYEAHL WDKSTWNQNQ NKKGKQASKL IFSVSFVSSF 120 MVDANIATPV YLGAYDDEEA AARAYDLAAL KYWGPGTLIN FPVTDYTRDL EEMQSLSREE 180 YLASLRRYPF GRKSSGFSRG IAKYRGLQSR WDASASRMPG PEYFSNIHYG AGDDRGTEGD 240 FLGSFCLERK IDLTGYIKWW GVNKTRQPES SSKASEDAKV EDAGTELKTL EHTSQATEPY 300 KVPNLSVLRG TQRKEKEISS PSSSSALSIL SQSPAYKSLE EKVLKIQESS TNENDENVNR 360 NIINMEKNHG KAIEKPVVSH GVPLGGAATA AALSLQKSMY PLTSLLTAPL LTNYNSLDPL 420 GDPILWTPFL PSGSSHTSEV TKTETSCSTY SYIPQEK*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK118789 | 0.0 | AK118789.1 Arabidopsis thaliana At2g41710 mRNA for putative AP2 domain transcription factor, complete cds, clone: RAFL21-12-C12. |