 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Csa02g075250.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
GRAS |
| Protein Properties |
Length: 426aa MW: 47763.4 Da PI: 5.0692 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa02g075250.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 311.7 | 1.6e-95 | 31 | 422 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalkl..fsevsPil 91
++lLl+cA+a++s+d++laq++++ l++laspdgd++qRla+ f++AL +r a++ ++ + l++ t+ + + +++++ +l f++++P++
Csa02g075250.1 31 EQLLLHCANAIESNDATLAQQIIWVLNNLASPDGDSTQRLASSFLRALMSRAASKIPSFA-FLSVAGTAASVsrkTLHRFSVIELaqFVDLTPWH 124
79****************************************************888765.33444333334112444445555589******** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefn 179
+f++++aN aIl+aveg + vHi+D+++++++Q p+L++++a++ ++ p l++T+++s +++ ++ee+g++L +fA++ ++ +ef+
Csa02g075250.1 125 RFGFIAANAAILDAVEGYSSVHIVDLSLTHCMQMPTLIDSMANKLhkQPLPLLKLTVIVSDDEShppplLGISYEELGSKLVNFATTRNIAMEFR 219
******************************************998667778*******9987777888888999********************* PP
GRAS 180 vl...vakrledleleeLrvkp...gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
++ +++ l++l +e+Lr +p +Eal+Vn++++lh+++de+++++ +r+ +Lk +++l+P++v++++++ad +s+++ r+ + +y++ +
Csa02g075250.1 220 IIsssYSDGLSSL-IEQLRNDPfvfNEALVVNCHMMLHYIPDENLTSSPTRSVFLKELRDLNPTIVTLIDEDADFTSTNLISRLRSLYNYMWIPY 313
*966555566666.9******************************************************************************** PP
GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve....eesgsl 358
d+ ++ l r se+r+++E+ ++++i nv+a+egaer+er e +++W er++ea F v ++e++a++ak++l++++ ++g++ + ++ + +
Csa02g075250.1 314 DTADMFLTRGSEQRQWYEAD-VSWKIDNVIAKEGAERVERLEPKSRWFERMREAKFAGVGFGEEVATEAKTMLEEHAtGWGMKRDvdedDDVERF 407
********************.9*******************************************************999987664433336789 PP
GRAS 359 vlgWkdrpLvsvSaW 373
vl+Wk++++v++SaW
Csa02g075250.1 408 VLTWKGHSVVFASAW 422
9************** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 426 aa
Download sequence Send
to blast |
MNTTRILNTT RPLWPGFSSS KSICGDANCM EQLLLHCANA IESNDATLAQ QIIWVLNNLA 60
SPDGDSTQRL ASSFLRALMS RAASKIPSFA FLSVAGTAAS VSRKTLHRFS VIELAQFVDL 120
TPWHRFGFIA ANAAILDAVE GYSSVHIVDL SLTHCMQMPT LIDSMANKLH KQPLPLLKLT 180
VIVSDDESHP PPLLGISYEE LGSKLVNFAT TRNIAMEFRI ISSSYSDGLS SLIEQLRNDP 240
FVFNEALVVN CHMMLHYIPD ENLTSSPTRS VFLKELRDLN PTIVTLIDED ADFTSTNLIS 300
RLRSLYNYMW IPYDTADMFL TRGSEQRQWY EADVSWKIDN VIAKEGAERV ERLEPKSRWF 360
ERMREAKFAG VGFGEEVATE AKTMLEEHAT GWGMKRDVDE DDDVERFVLT WKGHSVVFAS 420
AWAPI*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB007645 | 0.0 | AB007645.1 Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8K14. |
| GenBank | CP002688 | 0.0 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
