PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa02g051500.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family ERF
Protein Properties Length: 161aa    MW: 18034.3 Da    PI: 4.6566
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa02g051500.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP232.81.7e-101001361755
             AP2  17 AeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +eIrd + ng   r++lg+f taeeAa a+++a++ ++g
  Csa02g051500.1 100 SEIRDSTRNG--VRVWLGTFQTAEEAAMAYDKAALGIRG 136
                     699**44465..**********************98887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.314100145IPR001471AP2/ERF domain
SuperFamilySSF541716.15E-12100146IPR016177DNA-binding domain
SMARTSM003801.1E-11100151IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-17100145IPR001471AP2/ERF domain
CDDcd000188.00E-16100145No hitNo description
PfamPF008479.1E-5108136IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MAIGNIQEPD GLILKNVWAN YIRKSQQTDK RSPYHVPQGV SKTWEVLPTI AIIPEDSKEW  60
LPSLDMSMEV QEWTEFLNAF TSFPNKTSHD SITNPTIDSS EIRDSTRNGV RVWLGTFQTA  120
EEAAMAYDKA ALGIRGTQKP NTNFQLETVI KAMEMDCAPN *
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa02g051500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010434535.12e-89PREDICTED: ethylene-responsive transcription factor ERF091-like
SwissprotO495155e-74ERF91_ARATH; Ethylene-responsive transcription factor ERF091
TrEMBLR0F2342e-75R0F234_9BRAS; Uncharacterized protein
STRINGXP_010434535.16e-89(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.18e-66ERF family protein