PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa01g022060.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family G2-like
Protein Properties Length: 273aa    MW: 30806.6 Da    PI: 7.5065
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa01g022060.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like32.12.6e-10210260252
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 
                     pr+rW   L + F e v++L G  +At   i elm+ +gLt+++++  LQ 
  Csa01g022060.1 210 PRIRWEGRLQQVFDESVASLWGLTEATANDIHELMQAEGLTNKQIQNRLQV 260
                     8**********************************************9995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.3E-9207260IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-8210261IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MSYENKSLDE FLDHLHTIDP IPSKLAKIDE RLMELEEKIK EDEDLLKNIH DRTYRRNEEI  60
AQLRGIRQTV LQSQSSSSSS VQVHPTGLRE LELFPSSVSH FVRRPPHSSD HHRRSRLGDM  120
LSTTSSSSPS PFHPPDSSNR PLFGSLSASP SSTRPRLGNI SPVPLSSSPL NPFLYPHPQG  180
PNPRLQILQD PLPLPLPNPN QHPLPRPRVP RIRWEGRLQQ VFDESVASLW GLTEATANDI  240
HELMQAEGLT NKQIQNRLQV MKRGRDPADD SN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa01g022060.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023641331.14e-47uncharacterized protein LOC111831443
STRINGXP_010489931.11e-125(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2325233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19070.14e-09G2-like family protein