PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_012575197.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | ARR-B | ||||||||
Protein Properties | Length: 260aa MW: 30415.1 Da PI: 6.9568 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 63.8 | 3.1e-20 | 195 | 243 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 r W+++ H++Fv +v+qL G ++ Pk+il++m+v+gLt+ehv+SHLQ XP_012575197.1 195 FRFSWNQQFHNQFVIVVNQL-GLDNVKPKQILKIMDVPGLTREHVASHLQ 243 699*****************.9**************************** PP | |||||||
2 | Response_reg | 43.1 | 2.3e-15 | 29 | 125 | 13 | 109 |
HHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHH.HHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--H CS Response_reg 13 llrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkei.reeepklpiivvtahgeeedalealkaGakdflsKpfdp 104 +l+ + ++ y +v+++ +++ al+ll + + +D+i++D +m +++++++l++i ++ k+p+i++++ + + + ea+ Ga+d+ Kp ++ XP_012575197.1 29 ILHAMGNQFLY-QVTTCCKPSVALNLLSQTEcsFDVIIVDTDMQELSAYDFLEHIlLFH--KIPVIFMSSDYSTNSIMEAITKGASDYWIKPLEE 120 55555556668.9**************888889**********************5555..6*******************************99 PP HHHHH CS Response_reg 105 eelvk 109 +e + XP_012575197.1 121 QEFKN 125 98776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.40.50.2300 | 1.4E-21 | 14 | 147 | No hit | No description |
SuperFamily | SSF52172 | 1.57E-19 | 15 | 138 | IPR011006 | CheY-like superfamily |
SMART | SM00448 | 3.4E-6 | 15 | 127 | IPR001789 | Signal transduction response regulator, receiver domain |
PROSITE profile | PS50110 | 24.468 | 16 | 131 | IPR001789 | Signal transduction response regulator, receiver domain |
Pfam | PF00072 | 3.0E-11 | 18 | 126 | IPR001789 | Signal transduction response regulator, receiver domain |
CDD | cd00156 | 2.36E-13 | 39 | 130 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 1.9E-20 | 192 | 243 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.87E-13 | 192 | 246 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.8E-16 | 194 | 247 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MEFIKRLPKR FPIGLRVLVL DVDTTHHPIL HAMGNQFLYQ VTTCCKPSVA LNLLSQTECS 60 FDVIIVDTDM QELSAYDFLE HILLFHKIPV IFMSSDYSTN SIMEAITKGA SDYWIKPLEE 120 QEFKNMWKYV VKGVMINENK HEKKLNQNMN IFDMNNIFNR KRGREDEFNV PKQGIDSEDE 180 KHNHNDDYPP ATKKFRFSWN QQFHNQFVIV VNQLGLDNVK PKQILKIMDV PGLTREHVAS 240 HLQVSFVITV LYPCMLSHGW |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_012575197.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012575197.1 | 0.0 | two-component response regulator ARR14-like isoform X1 | ||||
TrEMBL | A0A1S3EH82 | 0.0 | A0A1S3EH82_CICAR; two-component response regulator ARR14-like isoform X1 | ||||
STRING | XP_004514128.1 | 0.0 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 9e-46 | response regulator 2 |