PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012575102.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family C2H2
Protein Properties Length: 257aa    MW: 28271.7 Da    PI: 7.1087
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012575102.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.0004100122123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C++ F ++  L  H++ H
  XP_012575102.1 100 FSCNYCKRKFFSSQALGGHQNAH 122
                     89*****************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.98E-698127No hitNo description
PROSITE profilePS5015711.323100127IPR007087Zinc finger, C2H2
PROSITE patternPS000280102122IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MMIPNLNLEA ENSLEVSSQV GSNLYLQETS HDLTKDSATT SSCLTNLTKP DIDPGPVSLD  60
LTLNFINPSD EDSKETSDTN SETKAEAHAA NSALRVHRIF SCNYCKRKFF SSQALGGHQN  120
AHKRERTVAK RAMRIGMFTE RYTSLASLPL HGSSFQSLGI IEAHAAMHQK QMQSSSSMKA  180
PAAKFEKECF GAASMLMHND HDVGIFWPGS FRQIDENAGI NLRYQNAHSS NLNTIFVAKS  240
PLPPPQTSTS PDLTLRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012575102.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012575102.10.0zinc finger protein 4-like
TrEMBLA0A1S3EGY80.0A0A1S3EGY8_CICAR; zinc finger protein 4-like
STRINGXP_004513911.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13233192
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.14e-28zinc finger protein 4