PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012575077.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family C2H2
Protein Properties Length: 387aa    MW: 44441.7 Da    PI: 10.3064
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012575077.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000257597123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C  C+k F+ +  L  H+r+H
  XP_012575077.1 75 HICLFCDKIFPLNKALYGHMRLH 97
                    68*******************99 PP
2zf-C2H215.64.8e-05259281123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     + C  C+k F+++  L  H+r+H
  XP_012575077.1 259 HICLFCDKIFPSNKALYGHMRLH 281
                     68*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.54E-52652No hitNo description
PROSITE profilePS501579.9512855IPR007087Zinc finger, C2H2
PfamPF139123.4E-82852IPR007087Zinc finger, C2H2
SMARTSM003551.32850IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002803050IPR007087Zinc finger, C2H2
SuperFamilySSF576672.57E-77597No hitNo description
SMARTSM003550.0887597IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.9375102IPR007087Zinc finger, C2H2
PROSITE patternPS0002807797IPR007087Zinc finger, C2H2
SuperFamilySSF576672.57E-7207234No hitNo description
SMARTSM003551.4212234IPR015880Zinc finger, C2H2-like
PfamPF139125.6E-8213236IPR007087Zinc finger, C2H2
PROSITE patternPS000280214234IPR007087Zinc finger, C2H2
SuperFamilySSF576674.05E-5257285No hitNo description
PfamPF139120.0037259282IPR007087Zinc finger, C2H2
SMARTSM003550.0078259281IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.242259286IPR007087Zinc finger, C2H2
PROSITE patternPS000280261281IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MRKKNHSPSS TYHSRVDNEK TNSSSMLHKC NSCDKKFSSG KPLGGHKRSH RSKLLQPPIK  60
KHGGGNHYDD VKHKHICLFC DKIFPLNKAL YGHMRLHSNR NDTYDDQQIL SAVRLSKYLP  120
PRSRETKKRC GQSIIDYEAI NAAQILCEMS RADPEMLNLS TDIDNQINKK LVTTMKDNNK  180
SLVNTRKKNP SPSSTYHSRV DNEKTNRSSM LQKCNLCDKK FNSGKALGGH KTLHRSKLLQ  240
PPIKKHGGGN NYDDVKHKHI CLFCDKIFPS NKALYGHMRL HSNRNDTYDD QQILSVVHLS  300
KYSPPRSRET KKRCGQSIID YEAINAAHIL REMSRADPEM LNLSTDIDNQ INKKLVTTTK  360
DNNKSLVVRF KFPKDKKIFQ THHEDCN
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012575077.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012575077.10.0zinc finger protein ZAT1-like
TrEMBLA0A1S3EGW00.0A0A1S3EGW0_CICAR; zinc finger protein ZAT1-like
STRINGXP_004513871.18e-69(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15177311
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.16e-12salt tolerance zinc finger