PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_012574495.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | bZIP | ||||||||
Protein Properties | Length: 245aa MW: 27962 Da PI: 10.2164 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.5 | 2.4e-12 | 173 | 228 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKka...eieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r +r++kNRe+A rsR+RK++ ++ eLe+kv+ L +eN +Lk eel + ++ XP_012574495.1 173 RRNKRMIKNRESAARSRARKQEifaYTNELEQKVQLLMEENARLKRHQEELWEAAS 228 699******************55559*******************99998877654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.0E-12 | 168 | 223 | No hit | No description |
SMART | SM00338 | 3.2E-8 | 169 | 237 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-10 | 173 | 227 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 3.93E-22 | 173 | 223 | No hit | No description |
SuperFamily | SSF57959 | 4.42E-8 | 173 | 225 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 176 | 191 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MEEVWKDMNL ASLNEQNTRP VTITNRSNFG NAILQDFLTR PLDSSSSSSS SNSSNSSSVV 60 SENVSLYCPV SSSSTPPLVT ALSLNSRPDF HVHPLIIHKN NSQLLHQHQH QHQHQHQHQH 120 QQQHHRHINA SNVSSFVNPS LPPFDRNVGS ASNSFTCFGK RFGEPPDVSP VERRNKRMIK 180 NRESAARSRA RKQEIFAYTN ELEQKVQLLM EENARLKRHQ EELWEAASGQ QKKKNNLYRT 240 LTAPF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_012574495.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027193461.1 | 1e-141 | protein FD-like | ||||
TrEMBL | A0A3Q7Y4R5 | 1e-140 | A0A3Q7Y4R5_CICAR; protein FD-like | ||||
STRING | XP_004512172.1 | 1e-141 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3755 | 32 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 2e-25 | bZIP family protein |