PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012573654.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family MYB
Protein Properties Length: 293aa    MW: 31561.8 Da    PI: 7.4594
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012573654.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.81.1e-171358147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEd+ l ++v++ G+++W++I+r ++ gR++k+c++rw + 
   XP_012573654.1 13 KGPWSPEEDDALQKLVERQGPRNWSLISRAIP-GRSGKSCRLRWCNQ 58
                     79******************************.***********985 PP
2Myb_DNA-binding55.11.7e-1767109347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+eEd+++++a++++G++ W+tIar +  gRt++ +k++w++ 
   XP_012573654.1  67 AFTPEEDDIIIRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 109
                      79******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129425.304863IPR017930Myb domain
SuperFamilySSF466891.68E-3110106IPR009057Homeodomain-like
SMARTSM007171.3E-151261IPR001005SANT/Myb domain
PfamPF002495.4E-171358IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.3E-251466IPR009057Homeodomain-like
CDDcd001671.27E-141557No hitNo description
SMARTSM007179.4E-1564112IPR001005SANT/Myb domain
PROSITE profilePS5129421.33265114IPR017930Myb domain
CDDcd001673.23E-1267110No hitNo description
Gene3DG3DSA:1.10.10.602.4E-2367113IPR009057Homeodomain-like
PfamPF002498.8E-1567109IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MMAVNRKDMD RIKGPWSPEE DDALQKLVER QGPRNWSLIS RAIPGRSGKS CRLRWCNQLS  60
PQVEHRAFTP EEDDIIIRAH ARFGNKWATI ARLLSGRTDN AIKNHWNSTL KRKCSSIFSA  120
DDPAFNPQPL KRSASVGAPG SPSGSDLSDS GAEGVVGTFA GASPTHVFRP VPVRMVAETA  180
SSEQDDGPPT SLSLSLSLPG VDSSDVMNRA AAVPINASPM SSVTASVAAK VSQEVGMGAL  240
NMSGELMAVM QEMVRNEVRS KSVMECVFKV SIDSETFQLN QLGLTGLILN LVD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mse_C3e-41121133104C-Myb DNA-Binding Domain
1msf_C3e-41121133104C-Myb DNA-Binding Domain
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012573654.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012573654.10.0transcription factor MYB73-like
SwissprotO231602e-86MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A1S3EE530.0A0A1S3EE53_CICAR; transcription factor MYB73-like
STRINGXP_007155887.11e-133(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84334124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23290.14e-70myb domain protein 70
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]