PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012573337.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family CAMTA
Protein Properties Length: 859aa    MW: 97318.8 Da    PI: 7.438
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012573337.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1130.75.3e-412010434118
            CG-1  34 pksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118
                      + g+++L++rk++r+frkDG++wkkk dgkt++E+he+LKvg+ e +++yYah+++np+f rrcywlL+++le+ivlvhy+e++
  XP_012573337.1  20 LRGGTVVLFDRKMLRNFRKDGHNWKKKNDGKTIKEAHEHLKVGNEERIHVYYAHGQDNPSFVRRCYWLLDKTLEHIVLVHYRETQ 104
                     5689******************************************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010761.8E-441104IPR005559CG-1 DNA-binding domain
PROSITE profilePS5143758.4521109IPR005559CG-1 DNA-binding domain
PfamPF038591.3E-3422102IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.9E-4302393IPR013783Immunoglobulin-like fold
SuperFamilySSF812962.66E-14304391IPR014756Immunoglobulin E-set
SuperFamilySSF484031.43E-16475602IPR020683Ankyrin repeat-containing domain
CDDcd002047.36E-12476599No hitNo description
Gene3DG3DSA:1.25.40.202.1E-14477602IPR020683Ankyrin repeat-containing domain
PfamPF127961.4E-7482569IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029713.337507572IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.846540572IPR002110Ankyrin repeat
SMARTSM002482.3E-5540569IPR002110Ankyrin repeat
SMARTSM00015420650672IPR000048IQ motif, EF-hand binding site
SMARTSM0001541684706IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.54685714IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.089704730IPR000048IQ motif, EF-hand binding site
SMARTSM00015310707725IPR000048IQ motif, EF-hand binding site
SMARTSM000150.021726748IPR000048IQ motif, EF-hand binding site
PROSITE profilePS5009610.072727751IPR000048IQ motif, EF-hand binding site
PfamPF006120.0052728748IPR000048IQ motif, EF-hand binding site
SMARTSM0001533806828IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.675808836IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 859 aa     Download sequence    Send to blast
MAQNLTGQLV GSEIHGFHTL RGGTVVLFDR KMLRNFRKDG HNWKKKNDGK TIKEAHEHLK  60
VGNEERIHVY YAHGQDNPSF VRRCYWLLDK TLEHIVLVHY RETQESQGSP VTPVNSNSSS  120
SSISDPLKSW ILSEDLDSQT NGAHTDGFSH EQKLHELNTL DWDDLVASNV NTATIPNGGS  180
EPCFYQQNQS LLNGSFGNVA GNPSAEIPSF GNVTPPESGS SNVSYFPESV NLQKNNVDFV  240
DTLSNEGLQS QNSFGMWMNN AISDTPCSVE VSALESSIPS SDHDPFSSLL MDNPQSSLPE  300
QVFNLTEVAP TWASSTEKTK VLVTGYFHND YQHLVKSNLV CVCGEISVPV EIVQVGVYRC  360
WVSPHSPGFV NLFLSFDGHK PISQVVNFEY RTPILHDPAT SMEETHNWIE FRLQMRLAHL  420
LFTTQKSLEV VASKISPTAL KEAEVFASKT IFISKSWQHF LKSSDGNRTP YPQAKNTLFE  480
IALKNKLREW LLEQIVLGRK TTEYDAQGQG VLHLCTILGY TWAISLFSWS RLSLDFRDKF  540
GWTALHWAAY NGMEKMVATL LSCGAKPNLV TDPTPQNPGG CTAADLAYVK GYDGLAAYLS  600
EKCLVEQFSA MSLAGNISGS LETITTDPVN PENLTEDQVY LKDTLAAYRT TAEAAARIQA  660
AFRERALKLR YKSVQFLSPE EEARQIVAAM KIQHAFRNFE TRKAMAAAAR IQHRFRTWKL  720
RKEFLHMRRQ AIRIQAAFRG FQVRRQYRKI IWSVGILEKA ILRWRLKRKG FRGLEVNPFE  780
DVKDEKHEND VEEDFFKSGR KQAXERVERS VVRVQAMFRS KKAQQEYSRM KMAHSQAQLE  840
LELEEIINYE VDMLTTKTS
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator (PubMed:14581622). Binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in response to cold. Contributes together with CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:14581622, ECO:0000269|PubMed:28351986, ECO:0000305|PubMed:11925432}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00435DAPTransfer from AT4G16150Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012573337.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, wounding, abscisic acid, H(2)O(2) and salicylic acid. {ECO:0000269|PubMed:12218065}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012573337.10.0calmodulin-binding transcription activator 5-like isoform X2
SwissprotO234630.0CMTA5_ARATH; Calmodulin-binding transcription activator 5
TrEMBLA0A1S3EBX00.0A0A1S3EBX0_CICAR; calmodulin-binding transcription activator 5-like isoform X2
STRINGAES650410.0(Medicago truncatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16150.10.0calmodulin binding;transcription regulators
Publications ? help Back to Top
  1. Ye J, et al.
    Arabidopsis formin3 directs the formation of actin cables and polarized growth in pollen tubes.
    Plant Cell, 2009. 21(12): p. 3868-84
    [PMID:20023198]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]
  3. Lan Y,Liu X,Fu Y,Huang S
    Arabidopsis class I formins control membrane-originated actin polymerization at pollen tube tips.
    PLoS Genet., 2018. 14(11): p. e1007789
    [PMID:30418966]