PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012573334.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family CAMTA
Protein Properties Length: 901aa    MW: 102266 Da    PI: 7.4621
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012573334.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1162.57.8e-51311463118
            CG-1   3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 
                     + k+rwl+++ei+aiL n++ ++++ ++ + pksg+++L++rk++r+frkDG++wkkk dgkt++E+he+LKvg+ e +++yYah+++np+f rr
  XP_012573334.1  31 EAKSRWLRPNEIHAILSNYKYFTIHVKPLNLPKSGTVVLFDRKMLRNFRKDGHNWKKKNDGKTIKEAHEHLKVGNEERIHVYYAHGQDNPSFVRR 125
                     459******************************************************************************************** PP

            CG-1  98 cywlLeeelekivlvhylevk 118
                     cywlL+++le+ivlvhy+e++
  XP_012573334.1 126 CYWLLDKTLEHIVLVHYRETQ 146
                     ******************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143776.2425151IPR005559CG-1 DNA-binding domain
SMARTSM010765.2E-7328146IPR005559CG-1 DNA-binding domain
PfamPF038591.1E-4531144IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.102.0E-4344435IPR013783Immunoglobulin-like fold
SuperFamilySSF812962.8E-14346433IPR014756Immunoglobulin E-set
SuperFamilySSF484031.54E-16517644IPR020683Ankyrin repeat-containing domain
CDDcd002047.87E-12518641No hitNo description
Gene3DG3DSA:1.25.40.202.3E-14519644IPR020683Ankyrin repeat-containing domain
PfamPF127961.5E-7524611IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029713.337549614IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.846582614IPR002110Ankyrin repeat
SMARTSM002482.3E-5582611IPR002110Ankyrin repeat
SMARTSM00015420692714IPR000048IQ motif, EF-hand binding site
SMARTSM0001541726748IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.54727756IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.089746772IPR000048IQ motif, EF-hand binding site
SMARTSM00015310749767IPR000048IQ motif, EF-hand binding site
SMARTSM000150.021768790IPR000048IQ motif, EF-hand binding site
PROSITE profilePS5009610.072769793IPR000048IQ motif, EF-hand binding site
PfamPF006120.0055770790IPR000048IQ motif, EF-hand binding site
SMARTSM0001533848870IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.675850878IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 901 aa     Download sequence    Send to blast
MAQNLTGQLV GSEIHGFHTL RDLDVGDTLE EAKSRWLRPN EIHAILSNYK YFTIHVKPLN  60
LPKSGTVVLF DRKMLRNFRK DGHNWKKKND GKTIKEAHEH LKVGNEERIH VYYAHGQDNP  120
SFVRRCYWLL DKTLEHIVLV HYRETQESQG SPVTPVNSNS SSSSISDPLK SWILSEDLDS  180
QTNGAHTDGF SHEQKLHELN TLDWDDLVAS NVNTATIPNG GSEPCFYQQN QSLLNGSFGN  240
VAGNPSAEIP SFGNVTPPES GSSNVSYFPE SVNLQKNNVD FVDTLSNEGL QSQNSFGMWM  300
NNAISDTPCS VEVSALESSI PSSDHDPFSS LLMDNPQSSL PEQVFNLTEV APTWASSTEK  360
TKVLVTGYFH NDYQHLVKSN LVCVCGEISV PVEIVQVGVY RCWVSPHSPG FVNLFLSFDG  420
HKPISQVVNF EYRTPILHDP ATSMEETHNW IEFRLQMRLA HLLFTTQKSL EVVASKISPT  480
ALKEAEVFAS KTIFISKSWQ HFLKSSDGNR TPYPQAKNTL FEIALKNKLR EWLLEQIVLG  540
RKTTEYDAQG QGVLHLCTIL GYTWAISLFS WSRLSLDFRD KFGWTALHWA AYNGMEKMVA  600
TLLSCGAKPN LVTDPTPQNP GGCTAADLAY VKGYDGLAAY LSEKCLVEQF SAMSLAGNIS  660
GSLETITTDP VNPENLTEDQ VYLKDTLAAY RTTAEAAARI QAAFRERALK LRYKSVQFLS  720
PEEEARQIVA AMKIQHAFRN FETRKAMAAA ARIQHRFRTW KLRKEFLHMR RQAIRIQAAF  780
RGFQVRRQYR KIIWSVGILE KAILRWRLKR KGFRGLEVNP FEDVKDEKHE NDVEEDFFKS  840
GRKQAXERVE RSVVRVQAMF RSKKAQQEYS RMKMAHSQAQ LELELEEIIN YEVDMLTTKT  900
S
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator (PubMed:14581622). Binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in response to cold. Contributes together with CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:14581622, ECO:0000269|PubMed:28351986, ECO:0000305|PubMed:11925432}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00435DAPTransfer from AT4G16150Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012573334.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, wounding, abscisic acid, H(2)O(2) and salicylic acid. {ECO:0000269|PubMed:12218065}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012573334.10.0calmodulin-binding transcription activator 5-like isoform X1
SwissprotO234630.0CMTA5_ARATH; Calmodulin-binding transcription activator 5
TrEMBLA0A1S3ED770.0A0A1S3ED77_CICAR; calmodulin-binding transcription activator 5-like isoform X1
STRINGAES650410.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42883459
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16150.10.0calmodulin binding;transcription regulators
Publications ? help Back to Top
  1. Ye J, et al.
    Arabidopsis formin3 directs the formation of actin cables and polarized growth in pollen tubes.
    Plant Cell, 2009. 21(12): p. 3868-84
    [PMID:20023198]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]
  3. Lan Y,Liu X,Fu Y,Huang S
    Arabidopsis class I formins control membrane-originated actin polymerization at pollen tube tips.
    PLoS Genet., 2018. 14(11): p. e1007789
    [PMID:30418966]