PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012573214.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family Nin-like
Protein Properties Length: 938aa    MW: 104541 Da    PI: 5.7505
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012573214.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK91.27.7e-29590640252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     ek++sl++l++yFs+++kdAAk +gvc+T+LKriCRq+GI+RWP+Rki+++
  XP_012573214.1 590 EKNVSLSVLQQYFSGSLKDAAKRIGVCPTTLKRICRQHGISRWPSRKINKV 640
                     79***********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.006579660IPR003035RWP-RK domain
PfamPF020424.5E-26592640IPR003035RWP-RK domain
SuperFamilySSF542771.01E-21843931No hitNo description
Gene3DG3DSA:3.10.20.2401.8E-22844926No hitNo description
PROSITE profilePS5174520.772847929IPR000270PB1 domain
SMARTSM006661.3E-20847929IPR000270PB1 domain
PfamPF005649.6E-17849928IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 938 aa     Download sequence    Send to blast
MEDQFSSTEK GIGFWTPLDV GMKSSTTSED MFNNISELMN FDTYAGWCNG SSSVNDHDHS  60
LVHEFSSFAS IPYSPHDGLN LVEHINGPFF MTEIGGGNYN DMDNSTSYGG NYQLEFLDTN  120
NSNETNNSDS QQGQNGSFQL LNSNNSSDMC NYLIPKSPSW SLDERMMSAL SFFKESAGEG  180
ILAQVWVPVK YGDEFILTTS DQPYLLDQKL AGYREVSRLF TFSAEMKMGS CPGLPGRVFI  240
SHVPEWTSNV GYYHKSEYLR LEHAISHDVR GSIALPISDM LSEVSCSAVL ELVTTKEKLN  300
FDKELEFVSH ALQRVNLRTI MPPRLLPQCV SINKRAALTE IIDVLRAVCH AHRLPLALTW  360
IPCCYSEGKG EESERIRIKE GHTSSDEKCV LCIEESACYI NDKMVGGFVH ACADHHLEEG  420
QGISGKALQS NHPFFYTDVK AYDVSEYPLV HHARKYSLNA AVAIRLRSTY TNDDDYVLEF  480
FLPINMTGSS EQQLLLDNLS DTMRRICKSL RTVSEAELRG IQGSQDGFQK ENVSGFFSLS  540
RGNSQIAFTT GDQDLFQMSL NATNLKNIQG HCQATNAPRK QIEKKRSAVE KNVSLSVLQQ  600
YFSGSLKDAA KRIGVCPTTL KRICRQHGIS RWPSRKINKV NRSLKKIQTV LDSVQGVEGV  660
LKFDPHTGGF VAGGSIIQQI GSHKSLMFPE NFFAQDLAPA PITTREPISV TPPPCENSAI  720
KLEDGLKKEN ASSVDCIQDS TSITMHDEPC QTSWIWTKTQ DCPKQTSIGS VFEKQDDQCG  780
LNKTSSFSLI EHELGGDENN QPTSSSMTDS SNASGSMVRR SSSGSQQSFE NRKRSKMKSV  840
CVDSESKFAV KANYKGDTIR FKFDPSVGCF RLYEEVTTRF KLQNGSFTLK YLDDEEEWVM  900
LVNDSDLKEC VEILSDVGTH CVKLLVRDIH GSIVTSNS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012573214.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012573214.10.0protein NLP9-like
RefseqXP_012573215.10.0protein NLP9-like
TrEMBLA0A1S3EBL30.0A0A1S3EBL3_CICAR; protein NLP9-like
STRINGXP_004507430.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34643465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43500.20.0Nin-like family protein