PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012572321.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family CAMTA
Protein Properties Length: 992aa    MW: 110658 Da    PI: 6.134
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012572321.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1175.95.3e-55131292117
            CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                     ++e ++rwlk+ e++ iL+n+ek+++t+e++++p+sgsl+L+nr+++r+fr+DG+ w+kk+dg++v E+he+LKvg+ve+l+cyYah+e+ ptfq
  XP_012572321.1  13 YQEaQRRWLKPAEVMYILQNHEKYQFTQEPPQQPTSGSLFLFNRRVLRFFRRDGHAWRKKRDGRAVGEAHERLKVGNVEALNCYYAHGEQIPTFQ 107
                     566699***************************************************************************************** PP

            CG-1  96 rrcywlLeeelekivlvhylev 117
                     rr+yw+L+ ++++ivlvhy+++
  XP_012572321.1 108 RRSYWMLDPAFDHIVLVHYRDT 129
                     *******************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143779.6929135IPR005559CG-1 DNA-binding domain
SMARTSM010763.6E-7612130IPR005559CG-1 DNA-binding domain
PfamPF038592.6E-4715128IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.104.8E-9423514IPR013783Immunoglobulin-like fold
PfamPF018334.5E-8429512IPR002909IPT domain
CDDcd001029.06E-6429514No hitNo description
SuperFamilySSF812969.8E-18429513IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.204.7E-15623719IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029714.955625717IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484036.53E-16627719IPR020683Ankyrin repeat-containing domain
CDDcd002048.53E-13630717No hitNo description
PfamPF127963.0E-7640718IPR020683Ankyrin repeat-containing domain
SMARTSM002480.0038658687IPR002110Ankyrin repeat
PROSITE profilePS5008811.06658690IPR002110Ankyrin repeat
SMARTSM00015100775797IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.961776805IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525402.66E-8776881IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.18833855IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.224835863IPR000048IQ motif, EF-hand binding site
PfamPF006120.0047836854IPR000048IQ motif, EF-hand binding site
SMARTSM000154.2E-4856878IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.359857882IPR000048IQ motif, EF-hand binding site
PfamPF006123.0E-5859878IPR000048IQ motif, EF-hand binding site
SMARTSM002482200901930IPR002110Ankyrin repeat
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 992 aa     Download sequence    Send to blast
MASGYEYDIN DLYQEAQRRW LKPAEVMYIL QNHEKYQFTQ EPPQQPTSGS LFLFNRRVLR  60
FFRRDGHAWR KKRDGRAVGE AHERLKVGNV EALNCYYAHG EQIPTFQRRS YWMLDPAFDH  120
IVLVHYRDTS EGRLSSGPGT QLSPGSSSAF SQSPSSYSNQ NPGSTSIVDD SYERNQSFSS  180
PGSAEVTSDI FILNNGMAHL EGADAESGTS TELKITQALR RLEVQLSLNE DNFEEIAPFS  240
NEDEATRDSK PQNHQGVICK QEKSEALSGP DDQGQFCDGY NARQVVFVGD SGQSYREFLD  300
HDFPDGNEKV LSWTELKKLN KFSSVASPQK NVYMPAGNDG SPSVSIREPV TSPENCCWTN  360
FNTNINNAGN SVFSLPQDVG GVTLPPYSSM VETREIHSGY YATLFDQSQI GASLEAGSSL  420
TVSQKQKFTI KAVSPEWGYA SETTKVFIIG SFLCHPSDSA WACMLGDVEV PVEMIQDGVM  480
CCEVPSHIPG KVTLCITSGN RESCSEVREF EYRDKTKSCT HCTPSETEAT RTPEELLLLV  540
RFGQMLLSAS SVSNDNNNES GIIIKQKADD DSWSHIIEAL LFGSGTSFGT INWLLEELLK  600
DKLQLWLTCR PWEADEETGC SLTKKEQGII HMVAGLGFEW ALNPILSCGV NINFRDINGW  660
TALHWAARFG REKMVASLIA SGASAGAVTD PSAQDPIGKT AAAIASSSGH KGLAGYLSEV  720
ALTSHLSSLK LEESELSKSS AELQADLTVS NVSKENIASS EDPTSLKDTL AAIRNTTQAA  780
ARIQAAFRTH SFRKRRANEA VAGMSRHDIS ASSIGNMPEL SAMSKLAFRN PREFNSAALS  840
IQKKYRGWKS RRDFLSLRQK VVKIQAHVRG YQVRKHYKVL WAVGILDKVV LRWRRKRSGL  900
RGFRPEMETN ENQDEDILKV FRKQKVDVEI EEAVSRVLSM VKSPDARQQY HRMLEKFRQA  960
KAELLASTSE EKLLSTSVED YLNMEDDYYQ YP
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012572321.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012572321.10.0calmodulin-binding transcription activator 4 isoform X2
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A1S3EBH00.0A0A1S3EBH0_CICAR; calmodulin-binding transcription activator 4 isoform X2
STRINGXP_004504403.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]