PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012571817.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family CAMTA
Protein Properties Length: 953aa    MW: 106985 Da    PI: 6.3594
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012571817.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1160.23.9e-50141303117
            CG-1   3 ke.kkrwlkneeiaaiLe.nfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                     +e k+rwlk+ e++ iL+ +++  e+t+ ++++p+ gs+ L+n++++r+frkDG++w+kkkdg+tv E+he+LKvg+ e+l+cyYah+een++fq
  XP_012571817.1  14 QEaKRRWLKPIEVLYILQnQHNTCEFTNVPPHQPSGGSVYLFNKRVMRFFRKDGHNWRKKKDGRTVSEAHERLKVGNFEALNCYYAHGEENRSFQ 108
                     56699*************7789999999******************************************************************* PP

            CG-1  96 rrcywlLeeelekivlvhylev 117
                     rr+yw+L+ e+e+ivlvhy+e+
  XP_012571817.1 109 RRSYWMLNPEYEHIVLVHYRET 130
                     ********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143772.1329136IPR005559CG-1 DNA-binding domain
SMARTSM010763.1E-6212131IPR005559CG-1 DNA-binding domain
PfamPF038593.3E-4415129IPR005559CG-1 DNA-binding domain
SuperFamilySSF812965.04E-9391466IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.201.6E-15578673IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.884579673IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484032.02E-16582674IPR020683Ankyrin repeat-containing domain
CDDcd002042.63E-13584671No hitNo description
PfamPF127966.2E-8585673IPR020683Ankyrin repeat-containing domain
SMARTSM002480.0098612641IPR002110Ankyrin repeat
PROSITE profilePS5008811.167612644IPR002110Ankyrin repeat
SMARTSM002483700651680IPR002110Ankyrin repeat
SMARTSM0001568729751IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.858730758IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525401.22E-11730830IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.3778800IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.95779808IPR000048IQ motif, EF-hand binding site
PfamPF006120.0091781799IPR000048IQ motif, EF-hand binding site
SMARTSM000158.0E-4801823IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.908802826IPR000048IQ motif, EF-hand binding site
PfamPF006128.0E-5804823IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 953 aa     Download sequence    Send to blast
MLPGFQYNIN DLFQEAKRRW LKPIEVLYIL QNQHNTCEFT NVPPHQPSGG SVYLFNKRVM  60
RFFRKDGHNW RKKKDGRTVS EAHERLKVGN FEALNCYYAH GEENRSFQRR SYWMLNPEYE  120
HIVLVHYRET NEGTSNSGPV TQLSPFSQSH NSHTTQNPET TSIVDYSCEP SQNFSSSGSL  180
EVTSDIVVMN NGMDHLEKTD AQALQQLEEQ LSLNEDGFKE VSPFYSEHEF FGAFSGPDDH  240
KQPYDGYNGT KDGSSNHYHE LLYYDFPGGH EKTLSWTEML QSRKSSSAIK LPEQHAHEAF  300
DNEKSLSSSG REMIANREIN YRLNPNTNSN NAENSVFSFP QDVGVKFSSH SSVETQDTNS  360
GCYETLFAQS QIQEPLDAYS SLTVGQKHKF TIKAVSPEYC YATEATKVII IGSFLCLPSD  420
STWACMFGDD GVICCEAPSH LLGKVALCIS SGNKEPCSEV TEFEFRNKTN SCTCCNTLET  480
EAARSPEELL LLVRFAEVLI SASSIKDNRT ESGSHLPTEQ KEDDDSWSHI IDSLLVGNRT  540
SSGTIDWLLQ ELLKDKLQHW LSCKSNEKDE GAGCSLSQKE QGVIHMASGL GFEWALNPIL  600
SCGVNVNFRD INGLTALHWA ARFGREKMVA SLIAAGASAG AVTDPNSQDP NGKTAASIAA  660
SNSYKGLAGY LAEVDLTSHL SSLTLEKCEA YQDSCELEAE LTVNSVSKKN LEASDDEASL  720
KNTLGAVRNA AQAAARIQAA FRAHSFRKRK EREAATNTYL NGHVFGVGSI AGNVRSSRYN  780
SAALSIQKKY RGWKGRKEFL ALRQKVVKIQ AHVRGYQARR QYKLMIWAVG ILDKVVLRWR  840
RKGVGLRSSP HKTKTNEESD DEDFLKAYRQ EKVHATIEKA LARVLSMAHS AGARRQYNRL  900
LEIYRQTKAE LGSRSDDTLL STTVEEAWYI EDDTLNAWYI EDDNLNQYPW ETL
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012571817.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1475380.0AC147538.24 Medicago truncatula clone mth2-135c7, complete sequence.
GenBankCU5711540.0CU571154.3 M.truncatula DNA sequence from clone MTH2-59O16 on chromosome 3, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012571817.10.0calmodulin-binding transcription activator 4-like
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A1S3E7L80.0A0A1S3E7L8_CICAR; calmodulin-binding transcription activator 4-like
STRINGXP_004502279.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45482950
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]