PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012571594.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 268aa    MW: 30929.1 Da    PI: 9.5089
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012571594.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-1882129253
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 
                     +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ +
  XP_012571594.1  82 RYRGVRQRH-WGSWVSEIRHP-----IlkTRIWLGTFETAEDAARAYDEAARLM 129
                     69******9.**********8.....556*********************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.49E-3581141No hitNo description
PROSITE profilePS5103221.1482139IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-3382139IPR001471AP2/ERF domain
SMARTSM003801.7E-4182145IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-2082141IPR016177DNA-binding domain
PfamPF008472.0E-1182130IPR001471AP2/ERF domain
PRINTSPR003675.2E-118394IPR001471AP2/ERF domain
PRINTSPR003675.2E-11105121IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MQKVIQPNYN NSQKSNLYVG PTSLIKLLPD PIEKLCHMRN NPTTKTHHPS FSITSLLLAF  60
TQKTLSEKNT FLFPNMARPQ QRYRGVRQRH WGSWVSEIRH PILKTRIWLG TFETAEDAAR  120
AYDEAARLMC GTRARTNFPY NPNASQSSSS KLLSANLTAK LHRCYMASLQ MTRPSFQESQ  180
RESSQSNIIS TSNVSMKSSE EIDHTTTMLP QKRHELEKQE SEGNWVFKKV KVENSQQFYK  240
PLEEDHIEQM IEELLHYGSI ELCSVIPP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-1981146470ATERF1
3gcc_A4e-1981146470ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00526DAPTransfer from AT5G25190Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012571594.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012571594.21e-143protein PPLZ02-like
SwissprotQ94AW53e-79ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLA0A1S3E8971e-142A0A1S3E897_CICAR; protein PPLZ02-like
STRINGAES735701e-128(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF110634110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.11e-55ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]