PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012571480.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family Nin-like
Protein Properties Length: 941aa    MW: 104233 Da    PI: 5.9874
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012571480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK90.61.3e-28600650252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     ek++sl++l++yFs+++kdAAk++gvc+T+LKriCR++GI RWP+Rki+++
  XP_012571480.1 600 EKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRHHGILRWPSRKINKV 650
                     89***********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151916.642582670IPR003035RWP-RK domain
PfamPF020423.0E-25602650IPR003035RWP-RK domain
SuperFamilySSF542773.6E-21834925No hitNo description
Gene3DG3DSA:3.10.20.2406.8E-23838920No hitNo description
PROSITE profilePS5174518.962841923IPR000270PB1 domain
SMARTSM006665.5E-22841923IPR000270PB1 domain
PfamPF005641.4E-16843922IPR000270PB1 domain
CDDcd064072.85E-30844922No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 941 aa     Download sequence    Send to blast
MEYPFYHTGK GIGYWQSPGT QLEGSTSLDG GISNLVSEDM PSSFSELMNF DNYAGLCSGP  60
SMTDQIMANE LPALASVLYQ SSDGLNIVEQ NSGQFYMTEV GGNSNNPQSS PIYGEKIVCQ  120
QMDTLLGFLD NNDANNLSSK QKINGSLQHV NTFDTGNCVI PKPPALSLDE RMLKALSFFK  180
ESAGGGILAQ VWVPIKHGGQ VFLSTSEQPY LLDQMLAGYR EVSRTFTFSA EGKPGCLPGL  240
PGRVFISKVP EWTSNVGYYN PSEYLRVEHA RNHEVRGSIA FPIFDMHSGL PCCAVLELVT  300
TKEKPNFDKE LEIICRSLQL VNLRTNVPFR LLPECLSSNK RAALTEIVDV LRSVCHAHRL  360
PLALTWIPCF YTKGTRDETT RIQIKEGNSS SREKNILCIE ESACYITDRV MEGFVHACVE  420
HHLEEGKGVA GKALQSNHPF FYPDVKAYDI SEYPLVHHAR KYSLNASVAI RLRSTYTYND  480
DYILEFFLPI NMKGSSEQQL LLDSLSGTMQ RICTSLRTVS EAELSGIKSL QVGFEKKNDP  540
RFPPLSTQNS QIPSIKENNG SVQKLSLKAS NQRKNGNEPS CNQETNGPRR RVEKNKSTSE  600
KNVSLSVLQQ YFSGSLKDAA KSIGVCPTTL KRICRHHGIL RWPSRKINKV NRSLKKIQTV  660
LDSVQGVEGG LKFDPSMGAF VAGGSTIQEI DEHESLFFPE KSTAQDPQNL ENKLEGKLKE  720
TNSSSVDCSE DSKSMAMDDC HEQACFGSVL GKSDKLVLNK GGLRIEKCKH NNTSSFFVDE  780
MDTCVDGDDE VVEHNNPTSS SLTDSSNGSG SMIHDISSGY EDFENQKHCK GKSTIVDGGS  840
KIVVKATYGE DTIRFKFDPS TGCFRLYEEV AARFKLQNGT FRLKYLDDEE EWVMLVNDSD  900
LQECLEILND MGTRNARFLV RDVPCVLSSS GSSNCYLGGS S
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012571480.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012571480.10.0protein NLP8-like
RefseqXP_012571483.10.0protein NLP8-like
SwissprotO228640.0NLP8_ARATH; Protein NLP8
TrEMBLA0A1S3E7U20.0A0A1S3E7U2_CICAR; protein NLP8-like
STRINGXP_004486872.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34643465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43500.20.0Nin-like family protein
Publications ? help Back to Top
  1. Yan D, et al.
    NIN-like protein 8 is a master regulator of nitrate-promoted seed germination in Arabidopsis.
    Nat Commun, 2016. 7: p. 13179
    [PMID:27731416]