PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012570782.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 303aa    MW: 33666 Da    PI: 6.5917
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012570782.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35.1e-2096145255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a+++a++k++g
  XP_012570782.1  96 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALKFRG 145
                     7********.**********7.....337*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.3E-1496145IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-3396154IPR001471AP2/ERF domain
PROSITE profilePS5103225.72596153IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-2396154IPR016177DNA-binding domain
SMARTSM003804.5E-3896159IPR001471AP2/ERF domain
PRINTSPR003678.8E-1297108IPR001471AP2/ERF domain
CDDcd000183.71E-16104155No hitNo description
PRINTSPR003678.8E-12119135IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MSYPLVSAPT HDGLGQAQNE WVQVQQVGHK RVREDDFHKT REVAASSHHQ DFTSIHTNVA  60
DFRLPSSQGP SSSEKTLTEA RRRESNEEES GERRRRYRGV RQRPWGKWAA EIRDPHKAAR  120
VWLGTFETAE AAARAYDEAA LKFRGSRAKL NFPENVTTTI SPTFPPNTSS TVSVNPATHY  180
SPPPPLQMQQ PPFTQFQGSS DLLTDYYQYS QILKGSADFQ GLEQWFYESQ MAAIHSSSSM  240
LLPSTAFSPA TQLSSASLPL FPGQQIEFFR PPEDHSHGED VGGGSGLPPS TWSDTSGYPP  300
PSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-2497158668ATERF1
3gcc_A6e-2497158668ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18095RRRESNEEESGERRRR
29196ERRRRY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012570782.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012570782.10.0ethylene-responsive transcription factor ERF110-like isoform X4
RefseqXP_027189819.10.0ethylene-responsive transcription factor ABR1-like isoform X1
RefseqXP_027189822.10.0ethylene-responsive transcription factor ERF110-like isoform X4
RefseqXP_027189823.10.0ethylene-responsive transcription factor ERF110-like isoform X4
TrEMBLA0A1S3E6X20.0A0A1S3E6X2_CICAR; ethylene-responsive transcription factor ERF110-like isoform X4
TrEMBLA0A3Q7X8500.0A0A3Q7X850_CICAR; ethylene-responsive transcription factor ABR1-like isoform X1
STRINGXP_004498981.11e-180(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.14e-20related to AP2 6