PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_012570510.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | Dof | ||||||||
Protein Properties | Length: 303aa MW: 33839.3 Da PI: 7.6347 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 128.9 | 1.5e-40 | 35 | 96 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +e+alkcprCdstntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss XP_012570510.1 35 PEQALKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 96 7899******************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 1.0E-29 | 23 | 88 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 6.0E-34 | 37 | 93 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.581 | 39 | 93 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 41 | 77 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence Send to blast |
MRFDYVVQQM SSNSSLENML GCSKEEQDTK AKPQPEQALK CPRCDSTNTK FCYYNNYSLT 60 QPRYFCKSCR RYWTKGGTLR NVPVGGGCRK NKRSSSTSKR VQDQSFTPNL INPFNNFPHS 120 SYDHNSNDFT LALARLQKQS CGQMGHFDDN DVSILGNPNS ATSSFNDVIG NHSTTNNGLF 180 DAIRSGLFLG SGIQYNYNNN NVQNLYGVYG NGDNMEVNSG NNNSNVCGVG EEMMFPYEQE 240 IRGAINVKQE LCSGREQSES KVFGGFPWQL NGGPNMGEIE SVRGNWNNGF TSNWQGVLHS 300 PLM |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_012570510.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT138411 | 1e-127 | BT138411.1 Medicago truncatula clone JCVI-FLMt-14J10 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012570510.1 | 0.0 | dof zinc finger protein DOF2.1 isoform X2 | ||||
TrEMBL | A0A1S3E426 | 0.0 | A0A1S3E426_CICAR; dof zinc finger protein DOF2.1 isoform X2 | ||||
STRING | XP_004487140.1 | 0.0 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G45610.1 | 5e-37 | Dof family protein |