PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_012569551.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | ERF | ||||||||
Protein Properties | Length: 147aa MW: 17061.7 Da PI: 8.446 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 40.5 | 6.9e-13 | 91 | 140 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr + +g++v+eIr p + kr +lg+f+ta+eA a+ a ++++e+ XP_012569551.1 91 KYKGVRMRA-SGKYVSEIRNPL----KaKREWLGTFDTAKEASDAYQAKKQEFEK 140 8*****999.7*********73....46********************9999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 2.2E-6 | 91 | 140 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.8E-18 | 91 | 142 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.95E-17 | 91 | 131 | No hit | No description |
SMART | SM00380 | 1.3E-7 | 91 | 140 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.84E-13 | 91 | 140 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 15.29 | 91 | 147 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.5E-6 | 92 | 103 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.5E-6 | 114 | 130 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MKGLYEIIII IIIILNLSLI MVPQSHISKR TKTLRIIMDD SDATDSSSDE DGNFEKRMMR 60 KRFVYEFTVP NFPRDNGCVD EIMNVDNGME KYKGVRMRAS GKYVSEIRNP LKAKREWLGT 120 FDTAKEASDA YQAKKQEFEK AQQCYLC |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_012569551.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027188914.1 | 4e-84 | ethylene-responsive transcription factor CRF1-like | ||||
TrEMBL | A0A3Q7X5F4 | 9e-83 | A0A3Q7X5F4_CICAR; ethylene-responsive transcription factor CRF1-like | ||||
STRING | XP_004494947.1 | 2e-69 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13451 | 20 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 3e-13 | ERF family protein |