PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004516631.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family Trihelix
Protein Properties Length: 447aa    MW: 51313.8 Da    PI: 6.4241
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004516631.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix82.17.5e-26120214183
        trihelix   1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 
                     +Wt+++v++Li+a+++++e++ ++            +kk++W++vsk+m+erg+++sp+qC++k+++lnkryk+++++ +++ +++++++ +++d
  XP_004516631.1 120 KWTDKMVRLLITAVSYIGEDVTSEGggggrrkfavlQKKGKWKSVSKVMAERGYRVSPQQCEDKFNDLNKRYKRLNDMLGRGtSCQVVENPALLD 214
                     7******************99975445667788888**********************************************5588888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.1E-23118243No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MEGNLSQGGI IQGGSSSFGG FDFPGSMRVQ RQSQQHPNTM NQHQNHPGQG SSVPSSIHDG  60
FPLTMGTLPN CDQTMSMNEF SQGDNRNKNS ASEEDEPEEG GDGHQEGGRG KKGLPWTRVK  120
WTDKMVRLLI TAVSYIGEDV TSEGGGGGRR KFAVLQKKGK WKSVSKVMAE RGYRVSPQQC  180
EDKFNDLNKR YKRLNDMLGR GTSCQVVENP ALLDVINYLS EKEKDDVRKI LNSKHLFYEE  240
MCSYHNCNRL HLPHDPALQR SLQIALRNRD DHDTDEVRRS YHDDHEEDDH DMETDDHDDF  300
EETYASHGDN RGIYCGLGGS TKRVRQGQED ANTFGNCFNS HEHNKSSYPH GQMVQPDGNQ  360
ALPESMRAAW LQQKQWIETR SVQLEEQKLQ IQMEMMELEK QRFKWQKFSQ KKDRELEKLK  420
LENERMKLEN ERMALELKRK DIGTSFN
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004516631.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004516631.10.0uncharacterized protein LOC101514780
TrEMBLA0A1S2Z7W30.0A0A1S2Z7W3_CICAR; uncharacterized protein LOC101514780
STRINGXP_004516631.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50013157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.11e-133sequence-specific DNA binding transcription factors