PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004515303.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family G2-like
Protein Properties Length: 347aa    MW: 39417.6 Da    PI: 7.0729
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004515303.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.81e-271568155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kprl+Wt++LH+rF+ea +qLGG+e +tPk +++lm+++gLtl+h+kSHLQkYRl
  XP_004515303.1 15 KPRLKWTHDLHQRFIEATNQLGGAE-TTPKGLMRLMGIPGLTLYHLKSHLQKYRL 68
                    79*******************9998.9***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-271370IPR009057Homeodomain-like
SuperFamilySSF466894.48E-151469IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-191569IPR006447Myb domain, plants
PfamPF002493.8E-61767IPR001005SANT/Myb domain
PfamPF143796.5E-20110155IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MKNQSKHFFL SSNAKPRLKW THDLHQRFIE ATNQLGGAET TPKGLMRLMG IPGLTLYHLK  60
SHLQKYRLGK SQQLEKYSDN KQEDYTETKS FDDHCSREIS TGENQINENM HIADALEMQM  120
EVEKKLYEQI EVEKHLQLRI EAQGKYLQSV LSKALRALSA YNSSPIGIKL KKSELSQLVI  180
MINNSCPNSP ISEVTGTGEL SLNSEERKMD RGTICLLESS LTSCESSERK EEKHSIEYLA  240
NLSTISLELP QMKMQSEEKS MSSRVSESIS MSDNSCNEAN GRKRNAATKS DGSHVEHCSY  300
KKRCGNKMKK EKLSEMFDLN SQCENEMDST GSKTLLDLNC SLNLWEP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-161470158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-161470158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-161470158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-161470158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-161470158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-161470158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-161470158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-161470158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004515303.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004515303.10.0myb family transcription factor PHL8-like isoform X2
SwissprotF4I2743e-64PHL8_ARATH; Myb family transcription factor PHL8
TrEMBLA0A1S2Z5850.0A0A1S2Z585_CICAR; myb family transcription factor PHL8-like isoform X2
STRINGXP_004515302.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.13e-66G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]