PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004514212.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | G2-like | ||||||||
Protein Properties | Length: 238aa MW: 27119.1 Da PI: 10.2952 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.9 | 5.4e-29 | 13 | 70 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkg...LtlehvkSHLQkYRl 55 k+rlrWt++LH+rFveav++LGG+++AtPk il+ mk g L+++hvkSHLQkYR+ XP_004514212.1 13 KERLRWTQQLHDRFVEAVNRLGGPDRATPKGILKGMKAMGileLSIYHVKSHLQKYRI 70 68******************************876655443339*************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.942 | 10 | 73 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.8E-26 | 11 | 71 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.74E-14 | 12 | 70 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 7.6E-22 | 13 | 71 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.7E-8 | 15 | 69 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 9.3E-12 | 102 | 140 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MGSTRSHGSS THKERLRWTQ QLHDRFVEAV NRLGGPDRAT PKGILKGMKA MGILELSIYH 60 VKSHLQKYRI SKLIPESTTR GKIEKRSISD ILPNFCSISA LQLKEVLQMQ AEVQKRITDR 120 LEVQKSLKLK IEAQRIYLER FGQSNQRTTI TRKTCKPFVG TSTPLPSLSK DSESLRTQSE 180 EEHQTTIKQK IIDEDVFLTG FELGSSTNQE FYNQTWNLSW SQLAAATCQS PLVPSFIL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 3e-19 | 13 | 72 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 3e-19 | 13 | 72 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 4e-19 | 13 | 72 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 4e-19 | 13 | 72 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 4e-19 | 13 | 72 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 4e-19 | 13 | 72 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 3e-19 | 13 | 72 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 3e-19 | 13 | 72 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 3e-19 | 13 | 72 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 3e-19 | 13 | 72 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 3e-19 | 13 | 72 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 3e-19 | 13 | 72 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004514212.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004514212.1 | 1e-176 | myb family transcription factor PHL7-like | ||||
TrEMBL | A0A1S2Z377 | 1e-175 | A0A1S2Z377_CICAR; myb family transcription factor PHL7-like | ||||
STRING | XP_004514212.1 | 1e-176 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10659 | 25 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 9e-49 | G2-like family protein |