PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004513787.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family STAT
Protein Properties Length: 718aa    MW: 81055.5 Da    PI: 6.6734
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004513787.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT186.43.4e-582223441122
            STAT   1 ldvvllnalgqpvekdve.vvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkk 94 
                     ldvvl++a+gqpv+k+ e v asL+yad+g++ve+++d+eapLL sydG+efss +rp+kll Grasfkl+isqLsskcdnrLf i+f++pkl +
  XP_004513787.1 222 LDVVLSDAFGQPVDKENEqVFASLVYADTGAPVENTSDDEAPLLSSYDGIEFSSRERPSKLLLGRASFKLRISQLSSKCDNRLFLIRFCVPKLGN 316
                     8**************975499************************************************************************** PP

            STAT  95 ypfleavskpirCisrsrntrsssltkk 122
                     ypfl++ + pirCisrsrntr s+l++k
  XP_004513787.1 317 YPFLQTNTCPIRCISRSRNTRLSTLVWK 344
                     *********************9999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF133852.5E-69172No hitNo description
Gene3DG3DSA:2.60.120.2009.2E-624172IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF498996.49E-825172IPR013320Concanavalin A-like lectin/glucanase domain
Gene3DG3DSA:3.30.505.104.9E-6607652IPR000980SH2 domain
SuperFamilySSF555507.09E-8609692IPR000980SH2 domain
PROSITE profilePS500019.589615672IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 718 aa     Download sequence    Send to blast
MGSDAMGREG YRTLKDLRLE IEGKEGTFSI CFWVYLMNST TFPAIILHQV HSDISQSAPF  60
LIINENKRVN ILPVLFLHEE APDTGSINSW TEVPHATVDF EFSLEKWVHV GCEVCPNNIR  120
LQINGEIVAK KSLSSLLNKE SNSSDLKKIT LANVGGNGNN VQGYVHNFEV FHNVSFIKDH  180
HLKDPPLKLS IDESAASEVE EESGGIWGIV GGKASCRRNF SLDVVLSDAF GQPVDKENEQ  240
VFASLVYADT GAPVENTSDD EAPLLSSYDG IEFSSRERPS KLLLGRASFK LRISQLSSKC  300
DNRLFLIRFC VPKLGNYPFL QTNTCPIRCI SRSRNTRLST LVWKRSTYAL QRLNLSQSSA  360
MDDRSLEHTH SGHEEKTNPL MKRFRVGLDK ISVSVNADST KKQSGVECNS HVWIPNQVEN  420
GFPRSLDGRS LNFEEDAYPS ESESIGERNS PSNSMGSRRY PISDITIFKY CLAGLTERSL  480
MLKEIATSSS DREISELAHQ VSHYSGCSHH GNQILSAKRL IEDGTNLWRA MSANNHHVPW  540
ESAVYEIEEQ FMKIASCGSR SFSHQDLEIL RRIAGCQEYL TQENFEKLWC WLYPVACIIS  600
RDWVNPIWNS TSPKWIEGFI TKEEAEASLQ GPAGFQEPGT FILRFPTSRS WPHPDAGSLI  660
VTYIGKDYKL RHRLLSMDHI YGSDRRIDVK PLQDMLLAEP ELSRLGRTMR SYKAHLQH
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004513787.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004513787.10.0SH2 domain-containing protein A-like isoform X1
SwissprotQ56XZ10.0SHB_ARATH; SH2 domain-containing protein B
TrEMBLA0A1S2Z2E20.0A0A1S2Z2E2_CICAR; SH2 domain-containing protein A-like isoform X1
STRINGXP_004513787.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67103036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.10.0SH2 domain protein B
Publications ? help Back to Top
  1. Yamada Y,Wang HY,Fukuzawa M,Barton GJ,Williams JG
    A new family of transcription factors.
    Development, 2008. 135(18): p. 3093-101
    [PMID:18701541]