PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004513361.2
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family NAC
Protein Properties Length: 272aa    MW: 30909.8 Da    PI: 5.3758
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004513361.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1293.6e-4091361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                     lppG++F Ptd el+++yL++k++++++ +   i +vd+y+  P++L  +  +++e+++yfF+kr++ky++g+r+ r +   g+Wkatg d+++ 
  XP_004513361.2   9 LPPGYKFLPTDVELIKYYLQPKIANHHIIA-GPIYDVDVYQNSPNNLYaMYKREGEQHTYFFTKRNRKYPKGERPDRgVRGFGFWKATGIDHPIN 102
                     79*************************888.88**************833444466789******************77779************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + +g+ +g kktLvfy+g+ + g kt+W+m+ey++
  XP_004513361.2 103 D-NGTIIGFKKTLVFYRGNPKGGDKTNWIMQEYTI 136
                     9.999****************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.1E-475161IPR003441NAC domain
PROSITE profilePS5100546.3159163IPR003441NAC domain
PfamPF023655.8E-2110136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MLNKVLQLLP PGYKFLPTDV ELIKYYLQPK IANHHIIAGP IYDVDVYQNS PNNLYAMYKR  60
EGEQHTYFFT KRNRKYPKGE RPDRGVRGFG FWKATGIDHP INDNGTIIGF KKTLVFYRGN  120
PKGGDKTNWI MQEYTINIEN IESTSTTPTS QLNNWVICKI YEHKRGDAIG NAKKRKHENE  180
NLEGENMEEV IPTPNLSPST PLTPTATSPP LSPSTPPTPT ATSPPPPLLP EMSSDDIDMA  240
NFQNCDYDIS SILNFDQNLE NEMFDIDQLL DS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A8e-37916420169NAC domain-containing protein 19
3swm_B8e-37916420169NAC domain-containing protein 19
3swm_C8e-37916420169NAC domain-containing protein 19
3swm_D8e-37916420169NAC domain-containing protein 19
3swp_A8e-37916420169NAC domain-containing protein 19
3swp_B8e-37916420169NAC domain-containing protein 19
3swp_C8e-37916420169NAC domain-containing protein 19
3swp_D8e-37916420169NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004513361.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004513361.20.0NAC domain-containing protein 41-like
TrEMBLA0A1S2Z1L10.0A0A1S2Z1L1_CICAR; NAC domain-containing protein 41-like
STRINGXP_004514442.11e-169(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1730657
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-41NAC family protein