PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004513134.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family HRT-like
Protein Properties Length: 393aa    MW: 44364 Da    PI: 9.6254
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004513134.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like59.36.3e-19266296131
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                     iCGvil+dGs+C+r+P+++R RC eHKGmRi
  XP_004513134.2 266 ICGVILNDGSICTRPPIEKRVRCFEHKGMRI 296
                     8*****************************7 PP

2HRT-like58.51.1e-18323353131
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                     iCG+il+d s+C++qPvkgR+RC+eHKGmR+
  XP_004513134.2 323 ICGIILDDSSTCSKQPVKGRQRCHEHKGMRT 353
                     8*****************************5 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004651.8E-475174IPR000305GIY-YIG nuclease superfamily
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MMVINRLKRE QCDHTKHDSS FSDWKILIGP SDWEDHSKGK EGCSRYRIPN LPQTFGPGVY  60
ELGIVVSRNY LGREIYKFAT DPCKVVVVYL GKAENVSARL QCYGRNGAHL SNASSSIESS  120
SSTLMRHSLF HHIFSKGYPI VYRWAPMENN SDALKTEAKL LDTFDYGWNT INNGRRRPYD  180
ILQMLDKIAS TTVTFSYVAK SLIPFIQNKV GIPIKSNKFP KTYDKSDEVD NYGSYRFLSK  240
IFKFNRSHPM IIQNSTSGAI EKYGKICGVI LNDGSICTRP PIEKRVRCFE HKGMRINVFN  300
AKAIGAPKLE LEIIDESITK TIICGIILDD SSTCSKQPVK GRQRCHEHKG MRTNVSNAKA  360
IRAPKLESEI IDDSISKTII CGIILNDGST CRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004513134.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004513134.20.0protein EFFECTOR OF TRANSCRIPTION 2-like
TrEMBLA0A1S2Z1640.0A0A1S2Z164_CICAR; protein EFFECTOR OF TRANSCRIPTION 2-like
STRINGXP_004513134.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF94093139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.18e-85effector of transcription2