PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004513072.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family NAC
Protein Properties Length: 418aa    MW: 47649.9 Da    PI: 6.8402
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004513072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM116.33.1e-36471901128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........t 78 
                     lp+G++F+Ptd+el+ e+L++kve+kk++ +        +i+   +i++++P++Lp  v+++  + +fF++ +k+y+tg+rk+r+          
  XP_004513072.1  47 LPAGVKFDPTDQELI-EHLEAKVEAKKMKSHPlidefipTIEGEdGICYTHPEKLP-GVTKDGLSRHFFHRPSKAYTTGTRKRRKiqnecdlqqG 139
                     799************.99*********5553344444434666646**********.555667799******************85666665443 PP

             NAM  79 ksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      + +W++tgk+++v++ +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  XP_004513072.1 140 GETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 190
                     3778************.999***********5547999999*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.84E-3941209IPR003441NAC domain
PROSITE profilePS5100532.97447209IPR003441NAC domain
PfamPF023653.0E-1648190IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MSNNNNLSCV RNSDLIDAKL EEHQLCGSNH CPSCGHNFES KPDWLGLPAG VKFDPTDQEL  60
IEHLEAKVEA KKMKSHPLID EFIPTIEGED GICYTHPEKL PGVTKDGLSR HFFHRPSKAY  120
TTGTRKRRKI QNECDLQQGG ETRWHKTGKT RPVMVNGKQK GCKKILVLYT NFGKNRKPEK  180
TNWVMHQYHL GQHEEEKEGE LVVSKIFYQT QPRQCNWSDR SATTIGEGNG EPNYRDEMSN  240
VNVNVNVNGV TPTTSFNHTL DNVQAQQLKS DHFSFIPFRK SFYEVGIGEA STASEVQAAS  300
RSYEEEVHER HKQQNHHIAT SAFHISPPPL HQTSIILDEN SYQVSRIMLQ NEHFQQQQHK  360
LGIGGRSTSC LEELIMGCTS TTHHIKDKEE SSITNSQEAE WLKYSSYWPD PDNPDHHG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-134519013140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004513072.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004513071.10.0NAC domain-containing protein 75
RefseqXP_004513072.10.0NAC domain-containing protein 75
RefseqXP_027193144.10.0NAC domain-containing protein 75
TrEMBLA0A1S2Z1030.0A0A1S2Z103_CICAR; NAC domain-containing protein 75
STRINGXP_004513071.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-139NAC domain containing protein 75