PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004511885.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family MYB
Protein Properties Length: 323aa    MW: 35450.2 Da    PI: 9.2226
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004511885.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding62.77.3e-201459147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEde l ++v+++G+++W++I++ ++ gR++k+c++rw + 
   XP_004511885.1 14 KGPWSPEEDEALQNLVEKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 59
                     79******************************.***********985 PP
2Myb_DNA-binding54.52.7e-1768110347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+eEd+ +v+a++++G++ W+tIar +  gRt++ +k++w++ 
   XP_004511885.1  68 AFTPEEDDTIVRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 110
                      79******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129427.229964IPR017930Myb domain
SuperFamilySSF466892.08E-3211107IPR009057Homeodomain-like
SMARTSM007171.1E-171362IPR001005SANT/Myb domain
PfamPF002492.5E-191459IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.3E-261567IPR009057Homeodomain-like
CDDcd001674.49E-171658No hitNo description
SMARTSM007174.9E-1465113IPR001005SANT/Myb domain
PROSITE profilePS5129420.59366115IPR017930Myb domain
CDDcd001672.33E-1168111No hitNo description
PfamPF002491.8E-1468110IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.609.3E-2368114IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0010200Biological Processresponse to chitin
GO:0046686Biological Processresponse to cadmium ion
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MNTTITRKEM DRIKGPWSPE EDEALQNLVE KHGPRNWSLI SKSIPGRSGK SCRLRWCNQL  60
SPQVEHRAFT PEEDDTIVRA HARFGNKWAT IARLLSGRTD NAIKNHWNST LKRKCSSIMI  120
DESQPLKRSV SAGAAIPVST GLYMNPPTPG SPSGSDVSES SVPVVSSSHI YRPVPRTVTI  180
LPPVETTSSS KSNDPPTSLS LSLPGVDSSS EDSNRVTEKT NPVPPPPQPP SAIPIPLLPI  240
MTAPTVSIPM AVPMHQFNEA QRGSVVPFNF SSELLTVMQE MIRTEVRSYM AGLEQQNGMC  300
YQKNDDGFRN GSVKRIGISR IDS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A3e-40131143104MYB PROTO-ONCOGENE PROTEIN
1h88_C7e-401311457158MYB PROTO-ONCOGENE PROTEIN
1h89_C7e-401311457158MYB PROTO-ONCOGENE PROTEIN
1mse_C2e-40131143104C-Myb DNA-Binding Domain
1msf_C2e-40131143104C-Myb DNA-Binding Domain
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00476DAPTransfer from AT4G37260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004511885.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004511885.10.0transcription factor MYB44-like
SwissprotO231601e-102MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A1S2YYD70.0A0A1S2YYD7_CICAR; transcription factor MYB44-like
STRINGXP_004511885.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84334124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.12e-95myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]