PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004511603.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 267aa    MW: 30053.9 Da    PI: 7.4654
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004511603.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.22.7e-1557108155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +  +++Wv+e r+p   + ++ +++lg++ t+++Aa+a++ a + l+g
  XP_004511603.1  57 PVYRGVRARD-NNKWVCEMRVP---NtINSKIWLGTYPTPQMAARAHDLASLTLRG 108
                     68*****999.8*********9...6667*********************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-1057108IPR001471AP2/ERF domain
PROSITE profilePS5103219.62558116IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-2558118IPR001471AP2/ERF domain
SMARTSM003804.3E-1958122IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-1858118IPR016177DNA-binding domain
PRINTSPR003677.5E-65970IPR001471AP2/ERF domain
CDDcd000182.59E-2259118No hitNo description
PRINTSPR003677.5E-68298IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MSNRGTSSCS SSSEPSCITT TDDKKQVKYH SDEEVILATT RPKKRSGRRV FRETRHPVYR  60
GVRARDNNKW VCEMRVPNTI NSKIWLGTYP TPQMAARAHD LASLTLRGTS ACLNFADSAW  120
RLTLPESTDA VEIRKAAMKA AELIAAEDEI NKQRDQQCVN EDPSNYEGTS TMNVEQLVST  180
SETEEMHDLI LNIANEPLMS PPMSPPHSTR DYASDYLADM DIFDTQVNQT RMGKGHKGTT  240
IIGTTLFFTK CYILMSNRVV LRPQIQN
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates cold or dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation. {ECO:0000269|PubMed:11798174}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004511603.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By high-salt stress. {ECO:0000269|PubMed:11798174}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004511603.10.0dehydration-responsive element-binding protein 1E-like
SwissprotQ9LN864e-51DRE1F_ARATH; Dehydration-responsive element-binding protein 1F
TrEMBLA0A1S2YXP50.0A0A1S2YXP5_CICAR; dehydration-responsive element-binding protein 1E-like
STRINGXP_004511603.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.16e-47ERF family protein
Publications ? help Back to Top
  1. Kazama D,Kurusu T,Mitsuda N,Ohme-Takagi M,Tada Y
    Involvement of elevated proline accumulation in enhanced osmotic stress tolerance in Arabidopsis conferred by chimeric repressor gene silencing technology.
    Plant Signal Behav, 2014. 9(3): p. e28211
    [PMID:24614501]
  2. Kazama D, et al.
    Identification of Chimeric Repressors that Confer Salt and Osmotic Stress Tolerance in Arabidopsis.
    Plants (Basel), 2013. 2(4): p. 769-85
    [PMID:27137403]
  3. Song GQ,Gao X
    Transcriptomic changes reveal gene networks responding to the overexpression of a blueberry DWARF AND DELAYED FLOWERING 1 gene in transgenic blueberry plants.
    BMC Plant Biol., 2017. 17(1): p. 106
    [PMID:28629320]
  4. Imran QM, et al.
    Transcriptome profile of NO-induced Arabidopsis transcription factor genes suggests their putative regulatory role in multiple biological processes.
    Sci Rep, 2018. 8(1): p. 771
    [PMID:29335449]