PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004511530.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 315aa    MW: 35078.8 Da    PI: 5.0122
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004511530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35.3e-20101152156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     ++y+GVr+++ +g+W+AeIrdp     r  r++lg+f taeeAa  +++a+ k++g+
  XP_004511530.1 101 KKYRGVRQRP-WGKWAAEIRDPA----RgVRVWLGTFETAEEAAMVYDNAAIKMRGP 152
                     59********.**********82....36**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.06E-34101158No hitNo description
PfamPF008471.8E-13102151IPR001471AP2/ERF domain
PROSITE profilePS5103223.828102159IPR001471AP2/ERF domain
SuperFamilySSF541713.07E-22102158IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.2E-31102158IPR001471AP2/ERF domain
SMARTSM003802.6E-38102165IPR001471AP2/ERF domain
PRINTSPR003673.3E-11103114IPR001471AP2/ERF domain
PRINTSPR003673.3E-11125141IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MTFKKHIHHF NVTKEQTLNQ PYPKLVRITV TDEDATDSSS DEEEPSNRNR GKKIINEIVI  60
EPCVNENNAA SSGVVSRKRN RATGRGKTRV PASRLVSYSG KKYRGVRQRP WGKWAAEIRD  120
PARGVRVWLG TFETAEEAAM VYDNAAIKMR GPDALTNFIT PPATCQLLSS ENKNQKAHNP  180
PLPGNNGYNS GEESQNKSSI FSPNSVLQCC SSSEEVADSS VITSKDDECS YVASKVESES  240
RFSIPSDLMF DFQVSSSLAN DAFENLNSNI FYGDIDWNGS SEVFDFGLES FITHRERDIF  300
QDIDDLFASD PLLAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-25100158362ATERF1
3gcc_A2e-25100158362ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004511530.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCR9621242e-62CR962124.2 Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004511530.10.0ethylene-responsive transcription factor CRF2-like
TrEMBLA0A1S2YXJ40.0A0A1S2YXJ4_CICAR; ethylene-responsive transcription factor CRF2-like
STRINGXP_004511530.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45034161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.23e-43cytokinin response factor 2