PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004511049.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 470aa    MW: 52026.1 Da    PI: 6.7339
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004511049.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1301.1e-09183225345
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     + k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  XP_004511049.1 183 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 225
                     568899************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.2E-8175228No hitNo description
SMARTSM003389.6E-8181244IPR004827Basic-leucine zipper domain
PfamPF077166.8E-7181227IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415183227IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-7185228No hitNo description
CDDcd147081.22E-21185237No hitNo description
PROSITE patternPS000360188203IPR004827Basic-leucine zipper domain
PfamPF141442.7E-33267342IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MGSRIRVGVE DEKGAQRGMP SFNSELPISN SCYTEGNAID TFHVSDFGAF GQSYRLEDAV  60
DLSGNPDSVF NSLKVSGQTI SPGPVRISAL DKLPTSLDNS PLTNQTQLYR LRLTKLQSSN  120
LGSGTILSGH TENQEESVMA DASPRTDIST DVDTDDKNQR FDQNQSLVAV GSDSSDRSKD  180
KSDQKTLRRL AQNREAARKS RLRKKAYVQQ LESSRLKLTQ LEQELQRARQ QGVFISSSGE  240
QTHSLSGNGA MQFDAEYARW LEEQNRQINE LRAAVNSHAS DTELRMIVDG ILAHYDEIFR  300
LKGVAAKADV FHLLSGMWKT PAERCFLWLG GFRSSELLKL LVSQLEPLTE QQLMGITNLQ  360
QSSQQAEDAL SQGMEALQQS LAETLSTGAP SSSGSSGNVA NYMGQMAMAM GKLGTLEGFI  420
RQADNLRQQT LQQMHRILTT RQSARALLAI HDYFSRLRAL SSLWLARPRD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004511049.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1473330.0BT147333.1 Medicago truncatula clone JCVI-FLMt-20A17 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004511049.10.0transcription factor TGA2.2-like
RefseqXP_012574257.10.0transcription factor TGA2.2-like
RefseqXP_012574259.10.0transcription factor TGA2.2-like
RefseqXP_027192591.10.0transcription factor TGA2.2-like
RefseqXP_027192592.10.0transcription factor TGA2.2-like
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A1S3EEJ70.0A0A1S3EEJ7_CICAR; transcription factor TGA2.2-like
STRINGXP_004511049.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-154TGACG motif-binding factor 6